Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq315 147 3e-30 seq11 141 1e-28 seq277 127 3e-24 seq417 100 4e-16 >seq315 Length=97186 Score = 147 bits (162), Expect = 3e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||||| ||||| || || ||||| | || || ||| | || Sbjct 213 TGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCCG 154 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| || || || ||| || ||||| |||||||| || |||| Sbjct 153 ATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 94 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || | Sbjct 93 AAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACA 34 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||||||||| ||| | || ||||| || Sbjct 33 TTCAAAAAGAATCTACTTTGCACTTAGTTTT 3 >seq11 Length=459 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || ||||| || || || || | || || ||| | | Sbjct 456 TGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTG 397 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| || || || ||| || ||||| |||||||| || |||| Sbjct 396 ATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 337 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || | Sbjct 336 AAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAACA 277 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | ||||| || || |||||||||| |||| Sbjct 276 TTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTA 229 Score = 132 bits (146), Expect = 8e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || ||||| || || || || | || || ||| | | Sbjct 228 TGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTG 169 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | || || || || || ||| || ||||| ||||| || || |||| Sbjct 168 ATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 109 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || | Sbjct 108 AAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACA 49 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | || ||||| || |||||||||| |||| Sbjct 48 TTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 1 >seq277 Length=184381 Score = 127 bits (140), Expect = 3e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || ||||| |||||||| || ||||||||| | ||||| || ||||| |||||||| || Sbjct 23 AAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGAC 82 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 |||||| ||| | ||||| || || ||||||||||| ||| | || ||||| || || Sbjct 83 GGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGA 142 Query 146247 TTAAGAGGAGGTAAATAAAT 146266 |||||||| ||| ||||||| Sbjct 143 TTAAGAGGTGGTCAATAAAT 162 >seq417 Length=227 Score = 100 bits (110), Expect = 4e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 146142 CCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACA 146201 || || ||||||||| | ||||| || ||||| |||||||| || |||||| ||| | Sbjct 227 CCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCT 168 Query 146202 GATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 ||||| || || ||||||||||| ||| | || ||||| || |||||||||| |||| Sbjct 167 GATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786162036776480