Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq315 147 3e-30
seq11 141 1e-28
seq277 127 3e-24
seq417 100 4e-16
>seq315
Length=97186
Score = 147 bits (162), Expect = 3e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | |||||||| ||||| || || ||||| | || || ||| | ||
Sbjct 213 TGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCCG 154
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 153 ATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 94
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || |
Sbjct 93 AAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACA 34
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242
| ||||||||||| ||| | || ||||| ||
Sbjct 33 TTCAAAAAGAATCTACTTTGCACTTAGTTTT 3
>seq11
Length=459
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || || ||||| || || || || | || || ||| | |
Sbjct 456 TGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTG 397
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 396 ATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 337
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || |
Sbjct 336 AAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAACA 277
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| ||| | ||||| || || |||||||||| ||||
Sbjct 276 TTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTA 229
Score = 132 bits (146), Expect = 8e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || || ||||| || || || || | || || ||| | |
Sbjct 228 TGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTG 169
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | || || || || || ||| || ||||| ||||| || || ||||
Sbjct 168 ATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 109
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || ||||| |||||||| || |||||| ||| | ||||| || |
Sbjct 108 AAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACA 49
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| ||| | || ||||| || |||||||||| ||||
Sbjct 48 TTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 1
>seq277
Length=184381
Score = 127 bits (140), Expect = 3e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186
|| ||||| |||||||| || ||||||||| | ||||| || ||||| |||||||| ||
Sbjct 23 AAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGAC 82
Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246
|||||| ||| | ||||| || || ||||||||||| ||| | || ||||| || ||
Sbjct 83 GGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGA 142
Query 146247 TTAAGAGGAGGTAAATAAAT 146266
|||||||| ||| |||||||
Sbjct 143 TTAAGAGGTGGTCAATAAAT 162
>seq417
Length=227
Score = 100 bits (110), Expect = 4e-16
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 146142 CCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACA 146201
|| || ||||||||| | ||||| || ||||| |||||||| || |||||| ||| |
Sbjct 227 CCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCT 168
Query 146202 GATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||||| || || ||||||||||| ||| | || ||||| || |||||||||| ||||
Sbjct 167 GATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGGTA 110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786162036776480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |