Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq11 125 6e-24
seq392 118 8e-22
seq315 113 3e-20
>seq11
Length=459
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | || ||||||||||||||||| ||||| |
Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || || || | ||||||||||| || || || |||
Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||| |||||| ||| ||
Sbjct 351 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGAC 409
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | || ||||| || || || || || || ||||| || |||||
Sbjct 410 TTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||||||||||||||| ||||| | | ||| | | || || | ||| || ||
Sbjct 33 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 92
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
|| | ||||||||||| || || || |||||||| || |||||||| ||| || | ||
Sbjct 93 GCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG-AATCTTGGACTT 151
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||| |||||| ||| ||||| | || ||||| || || || || ||
Sbjct 152 GACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGT 211
Query 29769 TTTAACAAATATCTGCAT 29786
|| ||||| || |||||
Sbjct 212 CTTGACAAAAATTTGCAT 229
>seq392
Length=124811
Score = 118 bits (130), Expect = 8e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||||||||| ||||| | | ||| | | ||| || | ||| || |||
Sbjct 104831 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 104890
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
|| | || |||||||| || || || |||||||| || |||||||| | || |||
Sbjct 104891 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 104950
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
|| | || | |||||| ||| ||| ||||| | || || || || |||||||| ||
Sbjct 104951 ACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105010
Query 29770 TTAACAAATATCTGCATTTT 29789
|| || || || ||||||||
Sbjct 105011 TTGACGAAAATTTGCATTTT 105030
>seq315
Length=97186
Score = 113 bits (124), Expect = 3e-20
Identities = 151/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| ||||||||||||||||| ||||| | | ||| | | || || | ||| || ||
Sbjct 18 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 77
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
|| | ||||||||||| || || || |||||||| || |||||||| ||| || | ||
Sbjct 78 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG-AATCTTGGACTT 136
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|||| | || | ||| || ||| ||| ||||| | || || || || || || || ||
Sbjct 137 GACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGT 196
Query 29769 TTTAACAAATATCTGCAT-TTTAAAA 29793
|||||| || || ||||| |||| ||
Sbjct 197 TTTAACGAAGATTTGCATATTTATAA 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217115482604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |