Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq11 125 6e-24 seq392 118 8e-22 seq315 113 3e-20 >seq11 Length=459 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || |||||||| | || ||||||||||||||||| ||||| | Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | ||| || || || | ||||||||||| || || || ||| Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | |||||| | || | ||| |||||| ||| || Sbjct 351 ATACCTTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGAC 409 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || ||||| || || || || || || ||||| || ||||| Sbjct 410 TTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||||||||||||||| ||||| | | ||| | | || || | ||| || || Sbjct 33 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 92 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 || | ||||||||||| || || || |||||||| || |||||||| ||| || | || Sbjct 93 GCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG-AATCTTGGACTT 151 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 ||| | || | ||| |||||| ||| ||||| | || ||||| || || || || || Sbjct 152 GACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGT 211 Query 29769 TTTAACAAATATCTGCAT 29786 || ||||| || ||||| Sbjct 212 CTTGACAAAAATTTGCAT 229 >seq392 Length=124811 Score = 118 bits (130), Expect = 8e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||| ||||||||||| ||||| | | ||| | | ||| || | ||| || ||| Sbjct 104831 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 104890 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 || | || |||||||| || || || |||||||| || |||||||| | || ||| Sbjct 104891 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 104950 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 || | || | |||||| ||| ||| ||||| | || || || || |||||||| || Sbjct 104951 ACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105010 Query 29770 TTAACAAATATCTGCATTTT 29789 || || || || |||||||| Sbjct 105011 TTGACGAAAATTTGCATTTT 105030 >seq315 Length=97186 Score = 113 bits (124), Expect = 3e-20 Identities = 151/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||||||||||||||| ||||| | | ||| | | || || | ||| || || Sbjct 18 GTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCG 77 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 || | ||||||||||| || || || |||||||| || |||||||| ||| || | || Sbjct 78 GCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG-AATCTTGGACTT 136 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| | || | ||| || ||| ||| ||||| | || || || || || || || || Sbjct 137 GACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGT 196 Query 29769 TTTAACAAATATCTGCAT-TTTAAAA 29793 |||||| || || ||||| |||| || Sbjct 197 TTTAACGAAGATTTGCATATTTATAA 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217115482604