Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq144 100 4e-16 seq133 84.2 3e-11 >seq144 Length=22619 Score = 100 bits (110), Expect = 4e-16 Identities = 184/270 (68%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 171568 CCATTACTTACTACaaaaaaaaTTGTATATACTAATATCCTTAAAGAACTTTTATGGGTT 171627 || |||||||||||||| || || | | | ||| || | || | || ||| || Sbjct 8603 CCCTTACTTACTACAAAGAAGGTTTTTTCGAGAGCTATTATTCATGAGTTGTTGTGGTTT 8544 Query 171628 ATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTTAAAGTTTGGAATGAT 171687 | |||| | || ||| | ||| |||| || | |||||||||| ||||| | | Sbjct 8543 GTACAAGGATGTACGGATGCTAAAAAATTGTCAGAAAAAGGTGTTAAAATTTGGGAAGGC 8484 Query 171688 AATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTA 171747 ||||| || | |||| ||||| | || || | || | || |||||||| Sbjct 8483 AATGGATCAAGGGAATACTTAGACTCCATAGGATTGAAAGACCGTCGCGAGGGTGATTTG 8424 Query 171748 GGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGACTGTTATACA 171807 |||||| |||| |||||||| ||||| ||| ||||| | || | |||||| | ||| Sbjct 8423 GGTCCAGTTTACGGATTTCAGTGGAGGCATTTTGGGGCAGAGTACAAGGACTGTGACACA 8364 Query 171808 GATTACACAGGACAAGGAGTGGACCAATTA 171837 || ||| | ||||||||||| || |||||| Sbjct 8363 GACTACTCTGGACAAGGAGTTGATCAATTA 8334 >seq133 Length=143762 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 || ||||| ||| ||| ||| |||||| ||||| | |||| ||| | ||||||||| Sbjct 69494 ATCAAAGTCAATCAGTTAGCTGGTTATGTTTCAGAAAATACAGGGTATCATCATGGTGAA 69435 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||| ||| | ||||||| ||| || || || || || |||| | |||||| || Sbjct 69434 CAATCATTAGTTCAAACTATTATTGGCTTAGCTCAGGACTTCATTGGCTCGAATAATTTA 69375 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 | ||| | || ||||| |||||| ||||| || || |||||||||| | Sbjct 69374 AATATTCTTAAGCCAAATGGTTCTTTTGGTTCCAGAGCAGCTGGTGGTAAAGATTTCTCA 69315 Query 165340 GCATCAAGATATATTT 165355 || | |||||||||| Sbjct 69314 GCTCCGAGATATATTT 69299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628527711651840