Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq11 206 5e-48 seq315 185 2e-41 seq277 138 2e-27 seq417 109 1e-18 seq83 87.8 4e-12 >seq11 Length=459 Score = 206 bits (228), Expect = 5e-48 Identities = 183/229 (80%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || ||||||||||| |||||||||||| || || || ||||||| Sbjct 1 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 60 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| |||||||||| |||| ||| || || || || || | ||||||||| ||||||| Sbjct 61 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAG 120 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || || || ||||| |||||| || ||| | Sbjct 121 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGA 180 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 181 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || ||| || || | |||||||||||| || || || ||||||| Sbjct 229 TACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAG 288 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||||||||||||||| ||| || || || || || | ||||||||| ||||| | Sbjct 289 ATAAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTG 348 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||| | || ||||| ||||| |||||| || ||| | Sbjct 349 GAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGA 408 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 409 CTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457 >seq315 Length=97186 Score = 185 bits (204), Expect = 2e-41 Identities = 173/220 (79%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 || ||||||||||| |||||||||||| || || || |||||||||| |||||||||| Sbjct 2 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTC 61 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 |||| ||| || || || || || | ||||||||| ||||| || || |||||||| || Sbjct 62 CTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 121 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 ||||||||| | || ||||| ||||| ||||| || ||| ||||| || || || || Sbjct 122 TTGAATCTTGGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGT 181 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATA 82817 ||| |||||||| || || || || || ||||| ||||| Sbjct 182 CTTACCTGTCAATGTTTTAACGAAGATTTGCATATTTATA 221 >seq277 Length=184381 Score = 138 bits (152), Expect = 2e-27 Identities = 117/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || ||||||||||| |||||||||||| || || || |||||||| Sbjct 154 ACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGA 95 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||||||||| |||| ||| || || || || || | ||||||||| ||||| || Sbjct 94 TAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGG 35 Query 82703 TATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| ||||||||||| Sbjct 34 AATACCTTCCTTGTCTTGAATCTT 11 >seq417 Length=227 Score = 109 bits (120), Expect = 1e-18 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || ||||||||||| |||||||||||| || || || ||||||| Sbjct 110 TACCACCTCTTAATCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAG 169 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGG 82699 ||| |||||||||| |||| ||| || || || || || | ||||||||| ||||| Sbjct 170 ATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGG 227 Score = 100 bits (110), Expect = 6e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || |||||||| ||||||||||| | || ||||| ||||| |||||| || ||| Sbjct 1 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 60 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 61 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 110 >seq83 Length=342754 Score = 87.8 bits (96), Expect = 4e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 143955 GATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACTTAGGAGA 144014 ||||| |||| ||||||||||| || || ||||| || |||||||| ||| | | | Sbjct 97096 GATGAATGGAATACTTGGAAAACAAGACTGGATCCTGTTTTGCATATTGAATTACGTCGT 97037 Query 144015 TGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAATAGCCAAT 144074 ||||| ||| | || || | | || |||||||| || || ||| | || || | Sbjct 97036 TGGGCGGATATCTTAATCGTCTCACCTTTAACAGCCAACACTTTATCTAAGATTTCATTA 96977 Query 144075 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATA 144120 ||| ||||||||||||||||||| | | || |||| ||| ||| Sbjct 96976 GGTTTATGCGATAATTTACTAACCAATGTTATACGAGCTTGGAATA 96931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821614630516