Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq387 178 3e-39 seq212 150 4e-31 seq381 109 1e-18 seq133 98.7 2e-15 seq204 86.0 1e-11 >seq387 Length=274674 Score = 178 bits (196), Expect = 3e-39 Identities = 512/777 (66%), Gaps = 13/777 (2%) Strand=Plus/Minus Query 110391 GTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTATTA 110450 ||||| || ||||||||||| |||||||| | ||| |||||| ||||| || | Sbjct 211731 GTTGCCATAGGTATTCATGGTAATGATATTGATAGTGTGATTGAAACCTATGAGTTAATG 211672 Query 110451 AGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGA 110510 || ||| | || ||||| | || || |||||||| |||||||||| Sbjct 211671 TCAAAGAAGTATTTCATACATGCATCACCAACTCTATTTAATTCAGGAACTAAATATAAT 211612 Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 | || ||||||| ||| | |||| || | ||||| || || || |||||||| | Sbjct 211611 TATTTATCTTCTTGTTTTTTACTAGCCATGGAAGATGACTCAATAGACGGTATTTACAAA 211552 Query 110571 GCTCTTAAAGAAA-CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCA 110629 | ||| | ||| |||| | |||||||| |||||||| || || | || || || Sbjct 211551 ACA-TTACATAAATCTGCGTTAATTTCTAAGGCATCTGGAGGTATAGGACTACATGTACA 211493 Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGT 110689 | ||||| | || ||| || |||| | | | || || |||||| ||| | || Sbjct 211492 TAATATTAGAGGAAGTGGATCATATATTTCGAGTTCTAATGGAACTTCAAGTGGCTTAGT 211433 Query 110690 TCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAG 110746 || ||||||||||| |||||| | || || | ||||| ||||||| ||| ||||| Sbjct 211432 ACCTATGTTAAGAGTTTTCAACAATACAGCGAGGTATGTTGATCAAGGAGGTAACAAGAG 211373 Query 110747 AAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAAT-TCTTAG 110805 | || | || || || ||| | || || ||||||| || || | | | | | |||| Sbjct 211372 ACCCGGAGCCTTCGCCATTTATATTGAGCCATGGCATTGTGACAT-TATAAGTGTATTAG 211314 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | | |||||||| || ||||| |||||| | ||||| ||||||| | | | Sbjct 211313 ATTTGAAAAAAAATCATGGTAAGGAAGAGATGAGAGCAAGAGATTTGTTTTATGGATTAT 211254 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 |||| | |||||||| ||| | | || || || || ||||| || | | | Sbjct 211253 GGATACCCGATTTATTTATGGAGAGAGTAAAACAAGATTTAGATTGGTCGCTCTTTTCCC 211194 Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 || || | ||||| || |||| ||||| | || ||| | | || ||||||| Sbjct 211193 CTGATGTTAGCCCTGGATTAAGTGATTGCTATGGCGATGATTTTAGAAATCTCTACGAAA 211134 Query 110986 AATATGAAAAAGAAGGCAA--GTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAA 111043 | ||||| | | ||| || | | | | | ||| ||| ||| || | ||| Sbjct 211133 AGTATGAGAGATCAGGAAAAGCTATAACTACC--ATTAAAGCACAAAAATTATGGCGTGC 211076 Query 111044 AATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTA 111102 ||| || || | ||| |||||||| |||||||| |||| ||||||| ||| || Sbjct 211075 AATTCTAGAGTGCCAAACCGAAACTGGTGGCCCTTATATGTTGTTTAAAGATGCAT-GTA 211017 Query 111103 ATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || | ||||| || |||| ||| ||||| || ||||| || ||| | ||||||| Sbjct 211016 ATAGAAAATCGAACCAAAAGAACTTAGGGACTATTAAATCATCTAACCTTTGCTGTG 210960 >seq212 Length=365203 Score = 150 bits (166), Expect = 4e-31 Identities = 331/490 (68%), Gaps = 7/490 (1%) Strand=Plus/Minus Query 110515 TGGCTTCTTGCTTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCT 110573 || ||||||| |||||| | | || || || || ||||| || ||||| || ||| | Sbjct 168629 TGTCTTCTTG-TTTCTTGGTTGCTATGAAAGAAGACTCTATCGATGGTATCTACGATAC- 168572 Query 110574 CTTAAAGAAAC-TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGA 110632 ||| |||| | ||| | ||||| || | |||| || |||||| | || | || | Sbjct 168571 CTTGAAGACATGTGCCTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTACATATCCACAA 168512 Query 110633 TATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCC 110692 ||||| || | || || | || || | || ||| |||| | ||| | |||| Sbjct 168511 CATTCGTTCTACTGGTGCTTACATTGCTGGTACTAATGGTACTTCTAATGGTATCATTCC 168452 Query 110693 AATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAA 110749 ||| || | || || ||| ||||||| ||||| ||||||||||||| |||| Sbjct 168451 TATGGTACGTGTTTTTAACAACACTGCTCGTTATGTCGATCAAGGTGGTAACAAGAGACC 168392 Query 110750 TGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACT 110809 ||| | ||||| | || | || || |||||| | ||||| ||||| ||| |||| | Sbjct 168391 AGGCGCCTTTGCCCTTTACTTAGAGCCATGGCATGCGGATATCTTTGATTTCATAGATAT 168332 Query 110810 TCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGAT 110869 | || ||||| || |||||| ||||| | || ||||| ||| | ||||| Sbjct 168331 AAGAAAGAATCATGGTAAGGAAGAAATCAGAGCTAGAGACTTATTCCCTGCCTTATGGAT 168272 Query 110870 TTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCA 110929 | | |||||||||||||| | || || ||||||| ||| || | | | ||| | Sbjct 168271 TCCTGATTTATTCATGAAGAGAGTCGAACAAAATGGAGACTGGACTTTGTTCTCTCCAAA 168212 Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 | |||||||| |||| ||||| || || | || || ||||| | ||| ||||| Sbjct 168211 TGAAGCTCCTGGTTTATCAGATGTCTACGGTGATGAATTCGAAGAATTGTACTCCAAATA 168152 Query 110990 TGAAAAAGAA 110999 |||||||||| Sbjct 168151 TGAAAAAGAA 168142 >seq381 Length=365744 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| || ||||| || | || || | ||||| || | |||||||||||| Sbjct 46318 CATTTGATGGATGATGATCCAGTGTTATTTAACCGTCAACCTTCGTTACATAAAATGTCT 46377 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 |||||||| |||| ||||||||| | | | || || |||| ||| || || Sbjct 46378 ATGATGGCGCATAGAGTCAAAGTTATGCCCTACTCTACTTTCAGATTGAATTTATCTGTC 46437 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | | || |||||||| ||||| ||||| ||||||||||| ||||||| |||||||| Sbjct 46438 ACTTCTCCATATAATGCAGATTTCGATGGTGATGAAATGAACTTGCATGTTCCTCAATCG 46497 Query 305489 AAGGTTACAATGACTGAATTATCAGAAATATGT 305521 ||| |||| | ||||| ||| |||| ||| Sbjct 46498 CAGGAAACAAGAGCAGAATTGTCACAAATCTGT 46530 >seq133 Length=143762 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/226 (70%), Gaps = 12/226 (5%) Strand=Plus/Minus Query 279873 TGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGG 279932 |||||||||| ||||| || |||||| | | | | |||| ||||||||||| || Sbjct 69562 TGGATGGTTTCAAACCAGGTCAACGTAAGGTACTTTACGGTTGCTTCAAAAGAAACTT-- 69505 Query 279933 TAAAG---GAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATC 279989 |||| ||||| || ||||||||| ||||||||||||||| || |||| |||| Sbjct 69504 -AAAGTCTGAAATCAAAGTCAATCAGTTAGCTGGTTATGTTTCAGAAAATACAGGGTATC 69446 Query 279990 ATCACGGTG---AAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGG 280046 |||| |||| || | | ||||| ||||| | || | || || || || || | Sbjct 69445 ATCATGGTGAACAATCATTAGTTCAA---ACTATTATTGGCTTAGCTCAGGACTTCATTG 69389 Query 280047 CTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTC 280092 || || || |||||| | ||| ||||||||| |||||||| Sbjct 69388 GCTCGAATAATTTAAATATTCTTAAGCCAAATGGTTCTTTTGGTTC 69343 >seq204 Length=210742 Score = 86.0 bits (94), Expect = 1e-11 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 |||||||| ||||| || | |||| | |||| || || | ||| | | ||| | | Sbjct 73591 TTCAATAGACAACCTTCTTTACATAGATTGTCCATTTTGTCGCATTACGCAAAAATCAGA 73532 Query 305396 TC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGA 305454 | |||| || ||||| | |||| | ||| ||||| || |||||||| ||||| || Sbjct 73531 CCATGGAGA-ACGTTTCGTCTTAATGAATGTGTATGTACTCCATATAATGCTGATTTCGA 73473 Query 305455 TGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||| |||||||||||||| ||||| |||||| Sbjct 73472 TGGTGATGAAATGAATATTCATGTTCCTCAA 73442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186806048518684