Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq11 114 3e-20 seq315 102 2e-16 seq277 95.1 3e-14 >seq11 Length=459 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | ||||| || || ||||| || ||||| ||| |||||| || | Sbjct 221 TTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTGATACTAT 162 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||||| || ||||| ||| || ||| |||||| | Sbjct 161 TGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATT 102 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || |||||||| ||||| || || || || || || || | ||||||||| | || || Sbjct 101 GATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAA 42 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| |||||| | ||| | ||||||||| Sbjct 41 AGAATCTACTTTGCACTTAGTTTTGAGA 14 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | ||||| || || ||||| || ||||| ||| |||||| || | Sbjct 449 TTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTGATACTAT 390 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||||| || ||||| ||| || ||| |||||| | Sbjct 389 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 330 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || |||||||| ||||| || ||||| || || || || | ||||||||| | || || Sbjct 329 GATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAACATTCAAAA 270 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| |||||| | || | ||||||||| Sbjct 269 AGAATCTACTTTACATTTGGTTTTGAGA 242 >seq315 Length=97186 Score = 102 bits (112), Expect = 2e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| || || || || || ||||| ||| ||| || || | || Sbjct 199 AAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCCGATACTATTGACAAT 140 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || ||||| ||| || ||| |||||| | || ||| Sbjct 139 GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTC 80 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| || || || || || || || | ||||||||| | || ||||| ||| Sbjct 79 GCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCT 20 Query 206365 ACTCTTCACCTTGTTTTGA 206383 ||| | ||| | ||||||| Sbjct 19 ACTTTGCACTTAGTTTTGA 1 >seq277 Length=184381 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || |||||||| ||| Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || || || || || || || | ||||||||| | || ||||| |||||| | ||| Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 131 TTAGTTTTGAGA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814076916924