Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq315 116 3e-21 seq11 113 4e-20 seq392 100 2e-16 >seq315 Length=97186 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 106255 TAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAAC 106314 |||| |||||||| || |||||||||||||| || |||||||||||| | ||| ||| Sbjct 219 TAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAAT 160 Query 106315 CCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTG 106374 | |||| || ||| | | || || || ||| ||||| ||||| | || | Sbjct 159 CTTCCGATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAG 100 Query 106375 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATT 106434 | |||||||| | |||| || || || |||||||| || || ||| | |||| Sbjct 99 ACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATT 40 Query 106435 ACAACATACAAAAAGAATCTACACTACATTTAGTATTGA 106473 ||||||| |||||||||||||| | || ||||| |||| Sbjct 39 ACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTGA 1 >seq11 Length=459 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || ||||| || ||||| || ||| | ||| ||| | Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| ||||| ||||| | || || ||| Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 338 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| || || || ||||||||||| || ||| | ||||||||| Sbjct 337 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAAC 278 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| ||||||| || ||||| ||| |||| || Sbjct 277 ATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || ||||| || ||||| || ||| | ||| ||| | Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || || ||| ||||| ||||| | || || ||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| || || || |||||||| || || ||| | ||||||||| Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| | || ||||| ||||| ||| |||| || Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3 >seq392 Length=124811 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||||||||| || || || || ||||| |||||||||||| | ||| ||| | Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || ||| | | || || || || ||||| ||||| | || ||| Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | || || || |||||||||||| || ||| | |||||| Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || | || ||||| || || ||| |||| || Sbjct 104850 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402327422893952