Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq212 212 5e-50 seq144 100 2e-16 >seq212 Length=365203 Score = 212 bits (234), Expect = 5e-50 Identities = 408/592 (69%), Gaps = 20/592 (3%) Strand=Plus/Minus Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768 || ||||| |||| || || || |||||||||||||| || || | || || || ||| Sbjct 283867 TTCCCAATCAAATACCACGAAATCTGGCAAATGTACAAGAAGGCTGAAGCTTCCTTCTGG 283808 Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGA--CTTAGCACATTGGATTGCATTA--AAACC 43824 || || |||||| | ||||| ||| || || | || |||| || | | |||| Sbjct 283807 ACTGCCGAAGAAATCGATTTAGGTAAGGATACTCATGAC--TGGAATGAAAAATTAAACA 283750 Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 |||| |||| | | || || ||| | ||||| || |||||||| ||||| || | Sbjct 283749 ACAACGAAAGATACTTCATCTCTAGAATCTTGGCATTCTTTGCTGCTTCTGACGGTATTG 283690 Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943 |||| ||||| |||||| || | ||||||||| | |||||||| ||||| Sbjct 283689 TCAACGAAAACTTGGTTGAAAACTTCTCTGCTGAAGTTCAAATTCCAGAAGCCAAATGTT 283630 Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003 | || || || |||||| || ||||| || || || |||| ||| | || || | Sbjct 283629 TCTACGGTTTCCAAATTATGATGGAAAACATCCACTCTGAAACCTACTCGTTACTTATTG 283570 Query 44004 ATACGTACATCAAAGATGGGCACGAGAAGCATCGA----TTGTTTAATGCGATAGA-AAC 44058 | || |||||||||||| || |||||| || || || ||||| || || ||| Sbjct 283569 ACACTTACATCAAAGATC--CAAAGGAAGCA--GACTTCTTATTCAATGCTATCGACAAC 283514 Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTC 44118 | | || || || | || || || ||||| | | |||||| | | ||||| | Sbjct 283513 ATCCCATGT-ATCAAGAAGAAGGCTGATTGGGCTTTAAGATGGATCAGTGATGATGATGC 283455 Query 44119 TTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175 || || ||| || | || || || |||| ||| ||||| |||||||| || || Sbjct 283454 GTTATTCGGCGAAAGATTAGTTGCCTTCGCAGCTGTTGAAGGTATTTTCTTCAGTGGTTC 283395 Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235 ||||| | || || ||||||||||| ||||||| |||||||| || || || || || Sbjct 283394 ATTTGCTTCTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCTGGTTTAACCTTCTCCAA 283335 Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287 || ||||| ||||||||||||| |||||| ||||| || ||||| ||| Sbjct 283334 CGAATTAATCTGTCGTGATGAAGGTTTACATACTGATTTCGCATGCTTATTA 283283 >seq144 Length=22619 Score = 100 bits (110), Expect = 2e-16 Identities = 268/403 (67%), Gaps = 10/403 (2%) Strand=Plus/Minus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 || || || || |||||||| || | |||| || || ||| | || |||| ||| Sbjct 8606 TTCCCCTTACTTACTACAAAGAAGGTTTTTTCGAGAGCTATTATTCATGAGTTGTTGTGG 8547 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAAT 40811 ||| | |||| ||||| ||||||| ||||| ||||||| ||| || | |||||| | Sbjct 8546 TTTGTACAAGGATGTACGGATGCTAAAAAATTGTCAGAAAAAGGTGTTAAAATTTGGGAA 8487 Query 40812 GCGCACAGTTCTAAAACATATTT-GTCTAGCATAGGATTACAAGATAGGGATGAAGGTGA 40870 | | | || | ||| || | || ||||||||| |||| | || ||||| Sbjct 8486 GGCAATGGATCAAGGGAATACTTAGACTC-CATAGGATTGAAAGACCGTCGCGAGGGTGA 8428 Query 40871 TCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGAC-ACTATGT 40929 | | ||||| ||||| |||||||||| | | |||||||| ||| | || | ||| || Sbjct 8427 TTTGGGTCCAGTTTACGGATTTCAGTGGAGGCATTTTGGGGCAGAGTACAAGGACTGTG- 8369 Query 40930 ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAAAT 40989 || | || || | ||||| | ||||||||||| ||||| | | | | ||| Sbjct 8368 ACACAGACTACTCTGGACAAGGAGTTGATCAATTACAAGATGTTATTAAAAAGTTGAAAA 8309 Query 40990 CCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATT 41046 | |||| ||||| || | || || ||| || ||||| || | || | || Sbjct 8308 CAAATCCATACGATA---GAAGAATTATCATGTCGGCATGGAATCCGCCAGATTTTGATA 8252 Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGT 41089 |||||| || || || |||||| | || || || || ||||| Sbjct 8251 AGATGGCCTTACCCCCATGTCATGTTTTCTGCCAATTCTACGT 8209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453849266220