Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq11 102 7e-17 seq212 84.2 2e-11 >seq11 Length=459 Score = 102 bits (112), Expect = 7e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093 ||| ||||||||||| ||||| ||||||||||| ||||| || | | | ||| | ||| Sbjct 245 CAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTT-CTACCGT 303 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 |||| | || ||||||||| |||| | | ||||| || || || | ||| || || | Sbjct 304 CTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 363 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | |||||| || | | || | ||| || | | ||| ||||||| || |||| Sbjct 364 CTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAG 423 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||| ||| || ||||| ||||||||| Sbjct 424 TCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093 ||| || || || || ||||| ||||||||||| ||||| || | | | ||| | ||| Sbjct 17 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTT-CTACCGT 75 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 | || | || ||||||||| |||| | | ||||| || || || | ||| || || | Sbjct 76 CCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGT 135 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | |||||| || | | | || | ||| || | | ||| ||||||| || |||| Sbjct 136 CTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAG 195 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||| ||| || ||||| ||||||||| Sbjct 196 TCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 230 >seq212 Length=365203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695 || || ||||| |||| |||||| || ||||| || | |||||| || || | ||| Sbjct 168236 CCATTTTGTTCGACTCTCTTCATGAATAAATCAGGAATCCATAAGGCAGGGAATAAGTCT 168295 Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTC 131754 |||||| | | ||||| |||| || ||| ||| | | || || || || || || || Sbjct 168296 CTAGCTCTGATTTCTTCCTTACC-ATGATTCTTTCTTATATCTATGAAATCAAAGATATC 168354 Query 131755 CGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATT 131811 ||||||||| || || || || | || | |||||| | | ||||| ||||||| Sbjct 168355 CGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCGCCTGGTCTCTTGTTACCACCTTGATC 168414 Query 131812 AACATGACGAACCATGTTGTTGTATACGCGCAACATGGG 131850 |||| |||| | ||||||| | || || | ||| || Sbjct 168415 GACATAACGAGCAGTGTTGTTAAAAACACGTACCATAGG 168453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932100573728