Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq11 102 7e-17
seq212 84.2 2e-11
>seq11
Length=459
Score = 102 bits (112), Expect = 7e-17
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| ||||||||||| ||||| ||||||||||| ||||| || | | | ||| | |||
Sbjct 245 CAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTT-CTACCGT 303
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
|||| | || ||||||||| |||| | | ||||| || || || | ||| || || |
Sbjct 304 CTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGT 363
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| |||||| || | | || | ||| || | | ||| ||||||| || ||||
Sbjct 364 CTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAG 423
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || |||| ||| || ||||| |||||||||
Sbjct 424 TCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 458
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| || || || || ||||| ||||||||||| ||||| || | | | ||| | |||
Sbjct 17 CAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTT-CTACCGT 75
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
| || | || ||||||||| |||| | | ||||| || || || | ||| || || |
Sbjct 76 CCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGT 135
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| |||||| || | | | || | ||| || | | ||| ||||||| || ||||
Sbjct 136 CTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAG 195
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || |||| ||| || ||||| |||||||||
Sbjct 196 TCTTACCTGTCAAAGTCTTGACAAAAATTTGCATA 230
>seq212
Length=365203
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/219 (69%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695
|| || ||||| |||| |||||| || ||||| || | |||||| || || | |||
Sbjct 168236 CCATTTTGTTCGACTCTCTTCATGAATAAATCAGGAATCCATAAGGCAGGGAATAAGTCT 168295
Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTC 131754
|||||| | | ||||| |||| || ||| ||| | | || || || || || || ||
Sbjct 168296 CTAGCTCTGATTTCTTCCTTACC-ATGATTCTTTCTTATATCTATGAAATCAAAGATATC 168354
Query 131755 CGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATT 131811
||||||||| || || || || | || | |||||| | | ||||| |||||||
Sbjct 168355 CGCATGCCATGGCTCTAAGTAAAGGGCAAAGGCGCCTGGTCTCTTGTTACCACCTTGATC 168414
Query 131812 AACATGACGAACCATGTTGTTGTATACGCGCAACATGGG 131850
|||| |||| | ||||||| | || || | ||| ||
Sbjct 168415 GACATAACGAGCAGTGTTGTTAAAAACACGTACCATAGG 168453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424932100573728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |