Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq392 98.7 6e-16
seq11 89.7 3e-13
>seq392
Length=124811
Score = 98.7 bits (108), Expect = 6e-16
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|||||||||||||| ||||| || | |||| | ||||| | ||| ||||| || ||
Sbjct 104837 TCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCAGCGAAG 104896
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
||||| | |||||||| || || | || ||||||||| |||| || | || ||| |
Sbjct 104897 ATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATC-TTAGACTTGACGTT 104955
Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
||| |||||| || ||||| | ||| || || ||||| ||||| || || ||
Sbjct 104956 GTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGAC 105015
Query 34695 AAAAATCTGCATGTTG 34710
||||| ||||| |||
Sbjct 105016 GAAAATTTGCATTTTG 105031
>seq11
Length=459
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||||||| | ||| || ||||||||||| ||||| ||
Sbjct 231 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGAT 290
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| |||||||| || || || | |||||||| || ||
Sbjct 291 AAGGTTCTACCGTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGA 350
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| || | || || | ||| || || || ||
Sbjct 351 ATACCTTCCTTGTCT-TGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGAC 409
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || ||||| || || || || |||||||| |||||
Sbjct 410 TTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727896919452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |