Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 9e-15 seq315 86.0 4e-12 seq277 82.4 5e-11 >seq11 Length=459 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| || ||| | || || || ||| || | || |||||| | Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| ||||| || || ||||| |||||| |||| || | Sbjct 397 GATACTATTGACAAT--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACC 340 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | || ||||| ||||| || ||||| || |||| | | ||| || ||||||| Sbjct 339 AACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACA 280 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||||||| ||||| |||||||||||| Sbjct 279 ACATTCAAAAAGAATCTACTTTACATTTGGTTTTG 245 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| || ||| | || || || ||| || | || |||||| | Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || |||| ||||| || || ||||| |||||| |||| || | Sbjct 169 GATACTATTGACAAC--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACC 112 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | || ||||| ||||| || ||||| || |||| | | ||| || ||||||| Sbjct 111 AACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACA 52 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||||||| |||||||| || |||||| Sbjct 51 ACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 17 >seq315 Length=97186 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || |||||||| || || ||||| | || || || ||||| | || |||||| Sbjct 217 AATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCT 158 Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 |||| | || ||||| ||||| || || ||||| |||||| |||| | Sbjct 157 TCCGATACTATTGACAAT--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAG 100 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||| | || ||||| ||||| || ||||| || |||| | | ||| || |||| Sbjct 99 ACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATT 40 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 ||||||| |||||||| |||||||| || |||||| Sbjct 39 ACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 2 >seq277 Length=184381 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| |||| || || ||| | || ||||| ||||| || ||||| || Sbjct 20 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAG 79 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| | | ||| || ||||||||||| |||||||| |||||||| || |||||| Sbjct 80 GACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860474339588