Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq11 95.1 9e-15
seq315 86.0 4e-12
seq277 82.4 5e-11
>seq11
Length=459
Score = 95.1 bits (104), Expect = 9e-15
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||| | || || || ||| || | || |||||| |
Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || ||||| ||||| || || ||||| |||||| |||| || |
Sbjct 397 GATACTATTGACAAT--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACC 340
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || ||||| ||||| || ||||| || |||| | | ||| || |||||||
Sbjct 339 AACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACA 280
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| |||||||| ||||| ||||||||||||
Sbjct 279 ACATTCAAAAAGAATCTACTTTACATTTGGTTTTG 245
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||| | || || || ||| || | || |||||| |
Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || |||| ||||| || || ||||| |||||| |||| || |
Sbjct 169 GATACTATTGACAAC--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACC 112
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || ||||| ||||| || ||||| || |||| | | ||| || |||||||
Sbjct 111 AACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACA 52
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| |||||||| |||||||| || ||||||
Sbjct 51 ACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 17
>seq315
Length=97186
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| |||||||| || || ||||| | || || || ||||| | || ||||||
Sbjct 217 AATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCT 158
Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
|||| | || ||||| ||||| || || ||||| |||||| |||| |
Sbjct 157 TCCGATACTATTGACAAT--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAG 100
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || ||||| ||||| || ||||| || |||| | | ||| || ||||
Sbjct 99 ACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATT 40
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
||||||| |||||||| |||||||| || ||||||
Sbjct 39 ACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 2
>seq277
Length=184381
Score = 82.4 bits (90), Expect = 5e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| || || ||| | || ||||| ||||| || ||||| ||
Sbjct 20 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAG 79
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||| || ||||||||||| |||||||| |||||||| || ||||||
Sbjct 80 GACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860474339588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |