Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq392 143 6e-29 seq11 120 7e-22 seq315 91.5 3e-13 >seq392 Length=124811 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | ||||| || ||||| ||||| ||||| | | ||| || || Sbjct 104812 TCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACC 104871 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || |||||||| | | |||||||||||| |||| |||||||| Sbjct 104872 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 104931 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || ||||| || || ||||| || |||||| || | || || Sbjct 104932 GTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAAT 104991 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | |||||||| Sbjct 104992 GGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030 >seq11 Length=459 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || |||||||| ||||| ||||| | | ||| || || || || | || Sbjct 26 GTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTG 85 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | | ||||||||| ||||||| ||||||||||| || ||||| Sbjct 86 CTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 145 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || || || ||||| ||| || || | ||||| ||||| || || Sbjct 146 GGACTTGACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGT 205 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| | ||||| Sbjct 206 CAAAGTCTTGACAAAAATTTGCAT 229 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || |||||||| ||||| ||||| | | ||| || || ||||| | ||||| || Sbjct 260 AGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGCTTACC 319 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| || | | ||||||||| || |||| ||||||||||| || ||||| || Sbjct 320 GGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTT 379 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || || || || || ||||| ||| || || | ||||| ||||| || || | ||| Sbjct 380 GACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGT 439 Query 211097 CTTTACAAACACCTGCAT 211114 ||| ||||| | ||||| Sbjct 440 CTTGACAAAAATTTGCAT 457 >seq315 Length=97186 Score = 91.5 bits (100), Expect = 3e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || |||||||| ||||| ||||| | | ||| || || || || | || Sbjct 11 GTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTG 70 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | | ||||||||| || |||| ||||||||||| || ||||| Sbjct 71 CTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT 130 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || || || || || ||| || || | || || ||||| || || Sbjct 131 GGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGT 190 Query 211091 GAGAGTCTTTACAAACACCTGCAT-TTTAT 211119 | || || || || | ||||| ||||| Sbjct 191 CAATGTTTTAACGAAGATTTGCATATTTAT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145405874060