Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq11 111 1e-19 seq315 107 1e-18 seq392 104 2e-17 seq277 84.2 1e-11 >seq11 Length=459 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || | || || || || ||||| | ||||| || || | Sbjct 457 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 398 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | || | || ||||| |||||| | || ||||| || Sbjct 397 GATACTATTGACAATGTCAAGTCCAAGA-TTCAAGACAAGGAAGGTATTCCACCAGACCA 339 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||| | ||||||| | || ||| |||||||| Sbjct 338 ACAAAGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAA 279 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| || || |||||||| ||||| || || |||| || Sbjct 278 CATTCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 231 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || | || || || || ||||| | ||||| || || | Sbjct 229 ATGCAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCT 170 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | || || ||| ||||| |||||| | || ||||| ||| Sbjct 169 GATACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 110 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || || ||||| || ||| | || |||| | || ||| ||||||||| Sbjct 109 CAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAAC 50 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || || || |||||||| || || |||| || Sbjct 49 ATTCAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGAGGTGG 3 >seq315 Length=97186 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23596 AATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655 ||| |||| | || ||||| || ||||||||||| | || || || || || || | Sbjct 229 AATCAATTTATAAATATGCAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTA 170 Query 23656 GAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGG 23714 ||||| || || | || ||| |||| ||| | || | || | || ||||| ||||| Sbjct 169 GAAGTCGAATCTTCCGATACTATTGACAATGTCAAGTCCAAGA-TTCAAGACAAGGAAGG 111 Query 23715 TGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774 | | || ||||| ||||| | || || || ||||| || ||| | || |||| | || Sbjct 110 TATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAAC 51 Query 23775 TTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 ||| ||||||||||| |||||||| || || || || |||||||| Sbjct 50 CTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTT 3 >seq392 Length=124811 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| |||||||| || || | || || || || || || | |||||||| || Sbjct 105030 AAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 104971 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||| | | || || || ||||| |||||| | || || || Sbjct 104970 TCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 104911 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| | ||||| || || || || ||| | ||||| | | || ||| |||||| Sbjct 104910 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGATTAC 104851 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| ||||| || ||||| || || ||||| ||||| || |||| || Sbjct 104850 AACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 104801 >seq277 Length=184381 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||| |||||| | || ||||| ||||| | || || || ||||| || ||| | || Sbjct 20 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAGCAATTAGAG 79 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 |||| | || ||| ||||||||||| |||||||| || || || || |||||||| Sbjct 80 GACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCACTTAGTTTTG 139 Query 23824 AGGTTGCGAGGAGG 23837 || || |||| || Sbjct 140 AGATTAAGAGGTGG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007770945552