Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10]
444 sequences; 11,620,116 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq392 174 4e-38
seq315 150 4e-31
seq11 150 4e-31
seq277 113 1e-19
seq6 96.9 8e-15
>seq392
Length=124811
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| | ||| | |||||||| ||||| | |||||||| | || ||||| ||
Sbjct 104812 TCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACC 104871
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| ||||||||||| | || ||||||||| || ||||||||||||||
Sbjct 104872 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 104931
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| || || || |||||||| | ||| || ||||| || ||
Sbjct 104932 GTCTTGGATCTTAGACTTGACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAAT 104991
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||||||
Sbjct 104992 GGTCTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 105030
>seq315
Length=97186
Score = 150 bits (166), Expect = 4e-31
Identities = 160/210 (76%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||| ||||||||||| | |||||||| | || ||||| || || |||| ||
Sbjct 11 GTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTG 70
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || ||||| || | || ||||||||| || |||||||||||||||||||| |||||
Sbjct 71 CTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT 130
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| ||| || || || || || | ||| || ||||| || || ||||| || ||
Sbjct 131 GGACTTGACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGT 190
Query 225690 CAAAGTTTTTATGAACACTTGCAT-TTTAT 225718
||| ||||| | ||| | |||||| |||||
Sbjct 191 CAATGTTTTAACGAAGATTTGCATATTTAT 220
>seq11
Length=459
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || | ||| ||||||||||| | |||||||| | || ||||| ||
Sbjct 242 TCTCAAAACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACC 301
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| ||||| || ||||| || | || ||||||||| || ||||||||||||||
Sbjct 302 GTCTTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 361
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| ||| || || || || || | ||| || ||||| |||||
Sbjct 362 GTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGAT 421
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | || | ||||||
Sbjct 422 AGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 457
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||||||||| | |||||||| | || ||||| ||
Sbjct 14 TCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACC 73
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|| |||| ||||| || ||||| || | || ||||||||| || ||||||||||||||
Sbjct 74 GTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 133
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| || || || || || || | ||| || ||||| |||||
Sbjct 134 GTCTTGAATCTTGGACTTGACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGAT 193
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | || | ||||||
Sbjct 194 AGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 229
>seq277
Length=184381
Score = 113 bits (124), Expect = 1e-19
Identities = 104/132 (79%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||||||||| | |||||||| | || ||||| ||
Sbjct 142 TCTCAAAACTAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACC 83
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|| |||| ||||| || ||||| || | || ||||||||| || ||||||||||||||
Sbjct 82 GTCCTCTAATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 23
Query 225618 GTCTTGGATCTT 225629
|||||| |||||
Sbjct 22 GTCTTGAATCTT 11
>seq6
Length=41443
Score = 96.9 bits (106), Expect = 8e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || ||||||||||| ||||||||
Sbjct 11641 GAAAATTTGACCATCGGTAATGGAAATAACATTAGTTGGAATATAAGCAGAGACATCACC 11582
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575
|||| ||||| | | ||||| || |||| || |||||||||
Sbjct 11581 ACCTTGGGTTTCAATGATTGGTAAAGCAGTTAAAGAACCACCACCA 11536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192524415988136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |