Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq392 104 5e-17 seq11 102 2e-16 seq315 96.9 8e-15 >seq392 Length=124811 Score = 104 bits (114), Expect = 5e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || ||||| ||||||||||| | ||| ||||| |||||||||| || || Sbjct 104831 GTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGCTTACCA 104890 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | || || ||||| | | || |||||||| ||||| || || ||| Sbjct 104891 GCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTAGACTTG 104950 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | |||||||| || ||||| | ||||| || || || || | |||| Sbjct 104951 ACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTC 105010 Query 152088 TTCACGAAGACCTGCATTTT 152107 || ||||| | |||||||| Sbjct 105011 TTGACGAAAATTTGCATTTT 105030 >seq11 Length=459 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | |||||| |||||||| ||||||||||| | ||| ||||| || ||||||| Sbjct 254 ATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTG 313 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || |||||||| || | || || ||||| | | || |||||||| |||||||| || Sbjct 314 CTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT 373 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 |||||| | || | | || ||| || ||||| | || ||||| || || || Sbjct 374 GGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGT 433 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 434 CAAAGTCTTGACAAAAATTTGCAT 457 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| |||||||| ||||||||||| | ||| ||||| || || |||| || || Sbjct 32 AGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACC 91 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 |||||| || | || || ||||| | | || |||||||| |||||||| || || Sbjct 92 GGCGAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTT 151 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | || ||| || ||||| | || ||||| || || || | ||| Sbjct 152 GACGTTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGT 211 Query 152087 CTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||| || || | ||||| ||| |||| ||| Sbjct 212 CTTGACAAAAATTTGCATACCACCTCTTAATCT 244 >seq315 Length=97186 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 |||||| |||||||| ||||||||||| | ||| ||||| || || |||| || || Sbjct 17 AGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACC 76 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 |||||| || | || || ||||| | | || |||||||| |||||||| || || Sbjct 77 GGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTT 136 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 |||| | || | | || ||| || ||||| | ||||| || || || || | || Sbjct 137 GACATTGTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGT 196 Query 152087 CTTCACGAAGACCTGCATTTT 152107 || ||||||| ||||| || Sbjct 197 TTTAACGAAGATTTGCATATT 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814236201924