Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq392 159 7e-34 seq11 158 3e-33 seq315 152 1e-31 seq417 100 6e-16 seq277 91.5 3e-13 >seq392 Length=124811 Score = 159 bits (176), Expect = 7e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 || || ||| ||| ||||| |||||||| |||| | || | ||||| |||| ||| Sbjct 104825 TGCAAGGTGGATTCCTTTTGAATGTTGTAATCAGATAAGGTTCTACCATCTTCTAATTGC 104884 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || ||||| || | |||||||||| |||||||| ||||||||||||||||| Sbjct 104885 TTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTA 104944 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 | || ||| | || |||||||| |||| ||| ||||| | || || |||||||| || Sbjct 104945 GACTTGACGTTGTCAATAGTGTCTGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTT 105004 Query 283077 AAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| ||||| || |||||||| Sbjct 105005 AAAGTCTTGACGAAAATTTGCATTTT 105030 >seq11 Length=459 Score = 158 bits (174), Expect = 3e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| |||||||| |||| | || | || ||||||| ||| || ||||| || Sbjct 38 TTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAA 97 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 98 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTT 157 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || |||| ||||||||| | ||||| |||||||| ||||||||||| || Sbjct 158 GTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGAC 217 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 218 AAAAATTTGCAT 229 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || ||||||||| |||||||| |||| | || | || || ||| Sbjct 249 ACCAAATGTAAAGTAGATTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCTTCT 308 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || ||||| || ||||| | ||||||||| |||||||| ||||||||||| Sbjct 309 AATTGCTTACCGGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 368 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || ||||| || |||| ||||||||| | ||||| |||||| Sbjct 369 ATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCGACTTCTAAGGTGATAGTCTTA 428 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| || || || ||||| Sbjct 429 CCTGTCAAAGTCTTGACAAAAATTTGCAT 457 >seq315 Length=97186 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| |||||||| |||| | || | || ||||||| ||| || ||||| || Sbjct 23 TTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAA 82 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 83 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 142 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || |||| ||||||||| | || || |||||||| ||||| || ||||| Sbjct 143 GTCAATAGTATCGGAAGATTCGACTTCTAAGGTAATGGTCTTACCTGTCAATGTTTTAAC 202 Query 283088 GAATATCTGCATTTTCATA 283106 ||| || ||||| || ||| Sbjct 203 GAAGATTTGCATATTTATA 221 >seq417 Length=227 Score = 100 bits (110), Expect = 6e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| ||||||||||| ||||| | || || | || ||||| || |||| |||| Sbjct 1 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTATCAGAAGATTCG 60 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | ||||| |||||||| ||||||||||| || || || ||||| Sbjct 61 ACTTCTAAGGTGATAGTCTTACCTGTCAAAGTCTTGACAAAAATTTGCAT 110 >seq277 Length=184381 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| |||||||| |||| | || | || ||||||| ||| || ||||| || Sbjct 118 TTCTTTTTGAATGTTGTAATCAGATAAGGTTCTACCGTCCTCTAATTGCTTACCGGCGAA 59 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||||| | ||||||||| |||||||| ||||||||||| ||||| Sbjct 58 AATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733245362376