Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq144 111 2e-19 seq110 89.7 7e-13 seq212 87.8 2e-12 >seq144 Length=22619 Score = 111 bits (122), Expect = 2e-19 Identities = 171/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 50452 TAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGAC 50511 ||||||| || || | | | || ||||| || || |||||||| ||||| ||||| | Sbjct 8455 TAGGATTGAAAGACCGTCGCGAGGGTGATTTGGGTCCAGTTTACGGATTTCAGTGGAGGC 8396 Query 50512 ATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAAC 50571 ||||||| || |||| | || ||| | | ||| || ||||| || |||||| Sbjct 8395 ATTTTGGGGCAGAGTACAAGGACTGTGACACAGACTACTCTGGACAAGGAGTTGATCAAT 8336 Query 50572 TGCAAAAAATTATAACGACGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCG 50631 | ||| | |||| | | |||||||||||| || ||||| | | ||| | ||| | | Sbjct 8335 TACAAGATGTTATTAAAAAGTTGAAAACAAATCCATACGATAGAAGAATTATCATGTCGG 8276 Query 50632 CCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAAT 50691 | |||||||| | ||| | ||| | | | ||||| || ||||||||||| || |||| Sbjct 8275 CATGGAATCCGCCAGATTTTGATAAGATGGCCTTACCCCCATGTCATGTTTTCTGCCAAT 8216 Query 50692 TTTA 50695 | || Sbjct 8215 TCTA 8212 >seq110 Length=108459 Score = 89.7 bits (98), Expect = 7e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 155885 ACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAA 155944 ||| |||||||| || ||||| ||| || |||| | || || | || |||||||| Sbjct 38865 ACGACCCTTTTCGTCTGGTAAAGAAATCTCGATCTGAATCTCGAATCTACCGGGTCTTAA 38924 Query 155945 TAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAA 156004 ||| || | || || || || ||||||||||||||| || |||||||||||||| || Sbjct 38925 TAACGCATTATCGATCAAATCTAATCTGTTGGTCATACCAATAATTAAAATGTTGTTCAA 38984 Query 156005 AGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || ||||| || || || | || || ||||| || || Sbjct 38985 TTGATCAACACCATCCATCTTCGCTAACAACTGATTTACGAC 39026 >seq212 Length=365203 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 63733 AGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGG 63791 ||| || | || || ||| |||| ||||||||||| || ||| ||| | |||||| || Sbjct 23219 AGAACTACGAAGATTCCACAAATTGGTGATAAATTCGCCTCTAG-ACACGGTCAAAAGGG 23161 Query 63792 TACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACC 63851 ||| |||| | | ||| |||| ||||||||||| ||||| | ||| | || || Sbjct 23160 TACTATTGGTGTTACATATAGACATGAAGATATGCCATTTACTTCTCAAGGTGTTGTTCC 23101 Query 63852 CGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 |||| | | || ||||| |||||| |||| ||||||||| || Sbjct 23100 CGATTTGATTATTAATCCCCACGCTATTCCATCTCGTATGACAGT 23056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667071497732640