Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Debaryomyces_20hansenii_20[genbank_20GCA_5F001682995.1_202016-07-10] 444 sequences; 11,620,116 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq11 129 1e-24 seq392 122 2e-22 seq315 111 4e-19 seq277 87.8 4e-12 >seq11 Length=459 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | ||||| || || |||||| | || || ||| || || Sbjct 226 CAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTGAT 167 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||| ||||| ||||| || ||||| ||||| ||| Sbjct 166 ACTATTGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 107 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || || | || || || || || | | ||||| ||| | Sbjct 106 AGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACATT 47 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || |||| | ||||||||| | ||| Sbjct 46 CAAAAAGAATCTACTTTGCACTTAGTTTTGAGATTAAGA 8 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | ||||| || || |||||| | || || ||| || || Sbjct 454 CAAATTTTTGTCAAGACTTTGACAGGTAAGACTATCACCTTAGAAGTCGAATCTTCTGAT 395 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| ||||| ||||| || || || ||||| ||| Sbjct 394 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 335 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || || | ||||| || || || | | ||||| ||| | Sbjct 334 AGATTGATTTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTATCTGATTACAACATT 275 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || | ||| | ||||||||| | ||| Sbjct 274 CAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGA 236 >seq392 Length=124811 Score = 122 bits (134), Expect = 2e-22 Identities = 164/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| || ||| | || || || || || ||| | || || ||| Sbjct 105030 AAAATGC---AAATTTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAA 104974 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 |||||||| || || |||||||| ||||| || ||||| ||||| || || || Sbjct 104973 TCTTCAGACACTATTGACAACGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCACCT 104914 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||| || | |||||||| || || || | |||||||| || || | | ||| Sbjct 104913 GACCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACCTTATCTGAT 104854 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| | ||||| ||||| || |||| | || || ||| | ||| Sbjct 104853 TACAACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGA 104806 >seq315 Length=97186 Score = 111 bits (122), Expect = 4e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | ||||| || || || ||| | || || ||| || || Sbjct 211 CAAATCTTCGTTAAAACATTGACAGGTAAGACCATTACCTTAGAAGTCGAATCTTCCGAT 152 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| ||||| ||||| || || || ||||| ||| Sbjct 151 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 92 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| || || | || || || || || | | ||||| ||| | Sbjct 91 AGATTGATTTTCGCCGGTAAGCAATTAGAGGACGGTAGAACCTTATCTGATTACAACATT 32 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGA 178134 ||||||||||| || |||| | ||||||| Sbjct 31 CAAAAAGAATCTACTTTGCACTTAGTTTTGA 1 >seq277 Length=184381 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||| ||||| ||||| || || || ||||| ||| || | || |||||||| || Sbjct 11 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCCGGTAAG 70 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || | || || || || || | | ||||| ||| | ||||||||||| || |||| Sbjct 71 CAATTAGAGGACGGTAGAACCTTATCTGATTACAACATTCAAAAAGAATCTACTTTGCAC 130 Query 178125 CTTGTTTTGAGACTCAGA 178142 | ||||||||| | ||| Sbjct 131 TTAGTTTTGAGATTAAGA 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724352274136