Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq24 105 1e-17
>seq24
Length=853129
Score = 105 bits (116), Expect = 1e-17
Identities = 178/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || ||||| |||| | || | || ||| | || ||| | || ||| ||
Sbjct 483379 ATCATCACCGAAGCTGTTGCCATTGAGCAAGAATTCTTAACAGAGGCTCTCCCCTGT-GC 483321
Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
|||| | ||||||||| | | || ||| || || ||||| ||||| || || || |
Sbjct 483320 CTTACTCGGCATGAACTCCGCTCTCATGAAGCAATATATCGAGTTCGTCGCTGATCGACT 483261
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
||| || |||||| |||||||| ||||| || |||||||| | || |||||
Sbjct 483260 TTTGACGGCTCTTGGTAACGAGAAATACTACAAGTCAGCAAACCCCTTCGACTTCATGGA 483201
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| || || || || |||||||||||||| || ||||| || |||| || ||||
Sbjct 483200 GAATATCTCACTCGCTGGTAAGACCAACTTCTTTGAGAAGCGGGTTGGTGATTACCAGAA 483141
Query 230625 GCCTGGTGTGATGAA 230639
| ||||||| |||||
Sbjct 483140 GGCTGGTGTCATGAA 483126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057816410112800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |