Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq24 105 1e-17 >seq24 Length=853129 Score = 105 bits (116), Expect = 1e-17 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || ||||| |||| | || | || ||| | || ||| | || ||| || Sbjct 483379 ATCATCACCGAAGCTGTTGCCATTGAGCAAGAATTCTTAACAGAGGCTCTCCCCTGT-GC 483321 Query 230446 CTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 |||| | ||||||||| | | || ||| || || ||||| ||||| || || || | Sbjct 483320 CTTACTCGGCATGAACTCCGCTCTCATGAAGCAATATATCGAGTTCGTCGCTGATCGACT 483261 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 ||| || |||||| |||||||| ||||| || |||||||| | || ||||| Sbjct 483260 TTTGACGGCTCTTGGTAACGAGAAATACTACAAGTCAGCAAACCCCTTCGACTTCATGGA 483201 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | || || || || |||||||||||||| || ||||| || |||| || |||| Sbjct 483200 GAATATCTCACTCGCTGGTAAGACCAACTTCTTTGAGAAGCGGGTTGGTGATTACCAGAA 483141 Query 230625 GCCTGGTGTGATGAA 230639 | ||||||| ||||| Sbjct 483140 GGCTGGTGTCATGAA 483126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816410112800