Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq46 91.5 1e-13 >seq46 Length=1090308 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||||||||| | Sbjct 104757 CCGCCACGAAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTATAGTCGGAA 104816 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||| ||||| ||||| || | || || | ||| || ||| ||| Sbjct 104817 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCCGGGGGG 104876 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 104877 ATGCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTGTCGGAGGACTCGACC 104936 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | || |||||||||||||| Sbjct 104937 TCAAGAGTGATGGTCTTGCCGGT 104959 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||| ||||||||| ||||| ||||| | Sbjct 104301 CCACCACGGAGACGGAGAACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTC 104360 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| ||||| || |||| || | ||| |||||| || Sbjct 104361 AAAGTTCGTCCATCCTCGAGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGG 104420 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| ||||| | | ||| || || | ||| | Sbjct 104421 ATACCCTCCTTATCTTGAATCTTGGACTTCACGTTGTCGATGGTGTCGGACGACTCAACT 104480 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||| || || | || ||||| || |||||||| Sbjct 104481 TCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCAT 104527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256318080960