Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq24 140 3e-28 >seq24 Length=853129 Score = 140 bits (154), Expect = 3e-28 Identities = 299/444 (67%), Gaps = 2/444 (0%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || || || |||| ||| | ||| |||||||| || || || || | | ||| ||||| Sbjct 483141 TTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTC 483200 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| || || || || ||| ||| |||||||| ||| || | || ||| Sbjct 483201 TCCATGAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAAGAGCCGTCAAA 483260 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 | || ||| || || || || ||||| || ||||| | | | ||||||| || | ||| Sbjct 483261 AGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAGTAAG 483320 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183 | |||| || |||||||| || | || || || ||| ||||| |||| ||| Sbjct 483321 GCACAGGGGAGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGATGATA 483380 Query 16184 TCTCTTACTACACTATTTAACGGAGGGTTTAAT-AAGTGTTTAAACATTATACAAGCAAA 16242 || || | || ||| | | | | | ||||| ||| | | || ||||| Sbjct 483381 TCCTGGACAGC-CTGTTTGCTTGGGCGGTGCTTCAAGTGAGAAAATAGAAGGCATGCAAA 483439 Query 16243 ATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCAT 16302 || ||||| || ||||| | | || | |||||| ||||| || ||||| | ||| Sbjct 483440 GTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGCCAT 483499 Query 16303 TAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTC 16362 || || || || || | |||||| ||||| ||||| |||||| ||||| || ||||| Sbjct 483500 GAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCCTTC 483559 Query 16363 AACTGCGGCAAATGCAACCAATCG 16386 || || || ||||||||||| || Sbjct 483560 CACGGCAGCGAATGCAACCAAACG 483583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462508762416000