Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq73 255 7e-63
seq24 100 4e-16
>seq73
Length=484926
Score = 255 bits (282), Expect = 7e-63
Identities = 1311/2068 (63%), Gaps = 55/2068 (3%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| || || |||| | || || ||||| ||||| || || || |
Sbjct 52329 GTGAATTGAATAGGCGCACTGGCGGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAG 52270
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| || |||| || |||||||| || || | ||| | || || ||
Sbjct 52269 CCAAGCTTCCAGCCAGTGAAATGCATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATG 52210
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| || ||||| || || ||||| ||||| || || | ||| |||||||| | |
Sbjct 52209 TGAATGTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAGCAGCCATCTGCACA 52150
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| | || | ||| ||||| | || || || | |||||||||| ||| | |
Sbjct 52149 ATGTTACGCTGAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATG 52090
Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|| | ||||||| ||||| |||||||| | ||||| | ||||| || | ||| |
Sbjct 52089 TTGGGAATATTCTGGATGGAACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGAC 52030
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402
|| | | | ||| | | | | || || ||||| || || ||||| |||||
Sbjct 52029 CAGAGTCCCATATCGACAAGATCCTTGAGAAGCCAAGGGTTCACCACCTGGAACTCTCCT 51970
Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462
| | || | || | |||||| || ||| || || || | |||| || ||
Sbjct 51969 GCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCA 51910
Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522
| || || ||| ||||| |||||||| || |||| | ||| || | | ||
Sbjct 51909 AGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCC- 51851
Query 62523 TATGTTC--TGATTTTAT-CTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACA 62579
||||| |||| | | ||| || | | |||||| ||| ||||| | || ||
Sbjct 51850 -ATGTTGCTTGATCTGCTGCTTCAAGCTAT-CCCAATCCCAGAGATCTGTAGGAGTGACT 51793
Query 62580 NNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATAT 62639
|||||| || || || || |||||| ||||||| |||||
Sbjct 51792 CCCCACATATCATATTGAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATAC 51733
Query 62640 GGTCCTTCCTTCTCAGCTAGTT-TAC--AACTCGCCTCTAATGCACCGTAATAAATGGTT 62696
|| || | ||| || || | ||| || || | ||||||| || || ||
Sbjct 51732 GGGCCATTAATCTTGGCAAGCTCTACGGAA---GCAGTAAGAGCACCGTGGTAGATAGTC 51676
Query 62697 TCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTA-AGAG 62755
|| ||||| | |||| |||| | ||| || || ||||| ||| | | ||
Sbjct 51675 TCGAAGATTTGAATATTGAGATGCTTTGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCC 51616
Query 62756 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815
|| ||| || ||||| ||||| || ||||||| | || || | ||| | || |
Sbjct 51615 AAGAAA-GCATCCGCCAATCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTT-GC 51558
Query 62816 GATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62874
|| | || ||||| | || || || |||| ||| || || || || | || ||
Sbjct 51557 TCTTCCTTGCCTCTGGGACGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGG 51498
Query 62875 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC-----TATT-A 62928
|| |||| ||| || || | || || | || ||| | ||||| ||| |
Sbjct 51497 TAACAACTTGGACGACTTCGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCA 51438
Query 62929 CAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCAT 62988
|||| || | ||||| ||| |||| || || || || ||||||| ||| | |
Sbjct 51437 CAAAGGTGGGAAGTGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGT 51378
Query 62989 ATTGTATTATCTCAGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGAT 63045
||| | ||||| ||||| | || |||| ||||||||| | || | || |
Sbjct 51377 ATTCGACAATCTCTGTGCACAAGTTGGAGCTACG---GATAGTTCCCAGGTTCTTCTGGT 51321
Query 63046 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63105
| ||||| ||| ||||||||||| || || |||||||| | ||||| || | || |
Sbjct 51320 TGCTCTTGCGGTTGCACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTG 51261
Query 63106 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC 63165
||| | || | | ||||| | ||||||||| | | | | |||| | |
Sbjct 51260 CTTCAAGGATGGAATACCAGAGCTTTTGAGCCTTTAC----GGTCTTTCGGCCCTTGCCC 51205
Query 63166 TTTCGTATAGAGTA----TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTA 63221
| || | | | ||||| ||| ||||| ||||| | |||| | | | |
Sbjct 51204 TCGCGCTCATACTTCTCGTACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCA 51145
Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281
||||| |||| |||||||||| | ||||||||||| | || || | ||||| |||
Sbjct 51144 GGACACTCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAG 51085
Query 63282 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
||||| |||||||| | || ||| || ||||| | || | | |||||| || ||
Sbjct 51084 AGATCGGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATG 51026
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||||| | |||||||||||| | | | ||||| ||||| || || | ||| || ||
Sbjct 51025 ATTCTTTCTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGC 50966
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | ||||| || ||||| || || ||||| | ||||| || ||||| || ||||
Sbjct 50965 AAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAAC 50906
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || |||||| | |||||| || || | ||| ||||| ||||| || ||| ||| |
Sbjct 50905 ACGCAGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGT 50846
Query 63521 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580
|| || || | || ||||| || || || || | || || || | || ||
Sbjct 50845 AGCTCGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACA 50786
Query 63581 TCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640
| || | || |||||||| || || ||||| || || |||| | | || || ||
Sbjct 50785 TGTCTTCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCA 50726
Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700
||||| || ||| ||||| ||| | || | ||||||||||| || || ||
Sbjct 50725 TGATGACATCTGAGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAA 50666
Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760
| || | || | | ||||| ||||| || || || || ||||| ||| ||
Sbjct 50665 GTACTTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGAT 50606
Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820
|| || || |||||||| | |||||| || || | ||||| | ||| || |
Sbjct 50605 ACCAACAGCCACACGCATGATCATGTGTTGTGGGCGCTCAACCACGGCGTTATTAAGACG 50546
Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 63878
| | ||| || ||||| || || || |||||||| | ||| ||||| || ||
Sbjct 50545 GAGGAGGTATGAACGCTCCAATGTCTTGAATCCAAAATATTGGTAGTTGAAA--TCACGA 50488
Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATA 63938
||||| | ||| | |||||||||| ||| | ||| | || | || | |||
Sbjct 50487 TCGTAGACAATCGCTGAATTGAGCTCTGCCTCGTGTTTCATGAC-ACAT---TCGTATGT 50432
Query 63939 CT----TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994
|| || || || || || | || ||||| || |||||||| | | | | |||
Sbjct 50431 CTGTTGAGAGATCATGGGCGATGGCTTGCCATTGCGTGGGTTAACATAATGGTAGAGATC 50372
Query 63995 CTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTC 64053
|| || || | ||| | || || || | |||||| ||||| || | ||| || |
Sbjct 50371 TGAGATGAC-GGACGAGAATTGCTTCTTGGTCTGCTTGTGGAGATTGGAAACGGCGATAC 50313
Query 64054 TGGCGGCTAGAATGGCATAATCCGGATG 64081
|| || |||||||||||||| |||||
Sbjct 50312 GAGCCGCGAGAATGGCATAATCTGGATG 50285
>seq24
Length=853129
Score = 100 bits (110), Expect = 4e-16
Identities = 208/309 (67%), Gaps = 3/309 (1%)
Strand=Plus/Plus
Query 33843 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33902
|| || ||||| || || |||| || || | || || || ||||| || ||
Sbjct 483747 TCCTTGACATACGTGTCAATCAGGAGGGAGTATGTCTCTGAGTGGATGTTCTCCATCATG 483806
Query 33903 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT 33962
||||| || || |||||||| | ||||| | |||||||||||| || || || ||
Sbjct 483807 ATCTGGAAACCATAGAAACAACGCGCCTCAGGAATCTGCACTTCACCACTGAAACGCTCA 483866
Query 33963 GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 34022
| || || || || || || ||||| ||| || || ||||| | || || | |
Sbjct 483867 ACCAAGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAGAACGCGAGAACGTGAGACACA 483926
Query 34023 AAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCC 34079
|| || || || ||||| |||||||| || | || ||| || || | |||
Sbjct 483927 AAGTACCGCTCATCATCATTTAGTCTGTTATTCCAGTCGTGGAGATCCTTGGAAAGATCA 483986
Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 34139
| |||||| | ||||| || || ||||||||||| |||||||| | |||||| | |||
Sbjct 483987 ATTTCTTCGGCGGTCCAGAAGGAGGCCTCTGCCTTCTTATACATCTGCCAGATCTGTTGA 484046
Query 34140 TATTGGATT 34148
| |||||
Sbjct 484047 GAGCGGATT 484055
Score = 93.3 bits (102), Expect = 5e-14
Identities = 288/440 (65%), Gaps = 8/440 (2%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|| ||||| ||||| || || || || || || || || || || | | ||| |||||
Sbjct 483141 TTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTC 483200
Query 33351 TCCATGAAATCAAACGGATTGG-TAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409
|||||||| || || || || | | || ||||| | ||| | | |||| || |
Sbjct 483201 TCCATGAAGTCGAAGGGGTTTGCTGAC-TTGTAG-TATTTCTCGTTACCAAG--AGCCGT 483256
Query 33410 CAA---TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33466
||| || ||| |||||||| || |||||| ||||| | | | ||||| || |
Sbjct 483257 CAAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAG 483316
Query 33467 GAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTAT 33526
| | || |||||| | || | |||||||| ||||||| || || | || ||
Sbjct 483317 TAAGGCACAGGGGAGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGAT 483376
Query 33527 AATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586
||| || | | || || || | || || || ||| | | |||||
Sbjct 483377 GATATCCTGGACAGCCTGTTTGCTTGGGCGGTGCTTCAAGTGAGAAAATAGAAGGCATGC 483436
Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646
|| ||| ||||| |||||||| | | || | ||||| ||||| || || || |
Sbjct 483437 AAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGC 483496
Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706
||| ||||||||||| || |||||||| || | || || || || ||||| || ||
Sbjct 483497 CATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCC 483556
Query 33707 TTCTACTGCAGCAAAGGCAA 33726
||| || ||||| || ||||
Sbjct 483557 TTCCACGGCAGCGAATGCAA 483576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813191276800
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