Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq46 87.8 2e-12 >seq46 Length=1090308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | || | |||| |||||||| || || |||||||| ||| Sbjct 104757 CCGCCACGAAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTATAGTCGGAA 104816 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| |||||||| || ||||| |||| ||||| || ||||| || || Sbjct 104817 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCCGGGGGG 104876 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||||| || ||| ||| Sbjct 104877 ATGCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTGTCGGAGGACTCGACC 104936 Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740 |||| || | ||||||||||| Sbjct 104937 TCAAGAGTGATGGTCTTGCCGGT 104959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060527552000