Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq73 237 2e-57
seq24 107 3e-18
>seq73
Length=484926
Score = 237 bits (262), Expect = 2e-57
Identities = 1313/2066 (64%), Gaps = 51/2066 (2%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||||||||| || || |||| | || || ||||| ||||| || || || |
Sbjct 52329 GTGAATTGAATAGGCGCACTGGCGGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAG 52270
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| || |||| || ||||||||| || || | ||| | || || ||
Sbjct 52269 CCAAGCTTCCAGCCAGTGAAATGCATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATG 52210
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| || ||||| || || ||||| ||||| || || | ||| |||||||| | |
Sbjct 52209 TGAATGTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAGCAGCCATCTGCACA 52150
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| | || | ||| ||||| | || || || | |||||||||| ||| | |
Sbjct 52149 ATGTTACGCTGAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATG 52090
Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|| | ||||||| ||||| |||||||| || ||||| | ||||| || | ||| |
Sbjct 52089 TTGGGAATATTCTGGATGGAACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGAC 52030
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| | | | ||| | | | | || || || || || || || || |||||
Sbjct 52029 CAGAGTCCCATATCGACAAGATCCTTGAGAAGCCAAGGGTTCACCACCTGGAACTCTCCT 51970
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| | || | || | |||||| || ||| ||||| || | | || || ||
Sbjct 51969 GCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCA 51910
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
| || || ||| || ||||||||||| || |||| | ||| || | | ||
Sbjct 51909 AGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCA 51850
Query 79195 TATGATCTGATTTTATCTTTTAGAGAT-TCCCAATCCCAAAGATCAGACGGGACAACATT 79253
| | |||| | | || | || | ||||||||||| ||||| | || ||
Sbjct 51849 TGTTGCTTGATCTGCTGCTTCA-AGCTATCCCAATCCCAGAGATCTGTAGGAGTGACTCC 51791
Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313
||| | ||||||||| || || || || |||||| ||||| ||||| ||
Sbjct 51790 CCACATATCATATTGAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATACGG 51731
Query 79314 TCCTTCCTTTTCGGCTAATTC-AC--AACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370
|| | | | ||| | || || || || | || |||| || || || ||
Sbjct 51730 GCCATTAATCTTGGCAAGCTCTACGGAA---GCAGTAAGAGCACCGTGGTAGATAGTCTC 51674
Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATGGATAATTTA-AGAGA 79428
||| || | ||||||||| | ||| || ||| | ||||| ||| | | || |
Sbjct 51673 GAAGATTTGAATATTGAGATGCTTTGCCTC-AGGTGAGTCAAAAGGAACACGCAGAGCCA 51615
Query 79429 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAA 79488
| ||| || || || ||||| || ||||||| | || || | ||| | || |
Sbjct 51614 AGAAA-GCATCCGCCAATCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTT-GCT 51557
Query 79489 ATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGAC 79547
|| | || ||||| | || || || |||| ||| || || || || | ||| ||
Sbjct 51556 CTTCCTTGCCTCTGGGACGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGT 51497
Query 79548 TATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATT-AC 79601
| |||| ||| || || | || || | || ||| | |||| ||| ||
Sbjct 51496 AACAACTTGGACGACTTCGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCAC 51437
Query 79602 AAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 79661
||| || | || | ||| |||| || || || || ||||||| ||| | ||
Sbjct 51436 AAAGGTGGGAAGTGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTA 51377
Query 79662 TTGTATTATTTCAGTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATT 79718
|| | || || ||||| | ||| |||| || ||||| | || | || ||
Sbjct 51376 TTCGACAATCTCTGTGCACAAGTTGGAGCTACGGATA---GTTCCCAGGTTCTTCTGGTT 51320
Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778
||||| ||| ||||||||||| || || ||||| || | ||||| || | || |
Sbjct 51319 GCTCTTGCGGTTGCACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGC 51260
Query 79779 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTT---TC 79835
||| | || | | ||||| | ||||||||| | ||| | ||| ||
Sbjct 51259 TTCAAGGATGGAATACCAGAGCTTTTGAGCCTTTACGGT---CTTTCGGCCCTTGCCCTC 51203
Query 79836 TCTTTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893
| || || || | ||| | || | ||| ||||| ||||| | ||||| ||| |||
Sbjct 51202 GCGCTCATACTTCTCGTACA-AAGC-TTCAAACTCATCTCCGTAGACATCTGCTAGACCA 51145
Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953
||||| || | |||||||||| | ||||||||| | | || || | ||||| |||
Sbjct 51144 GGACACTCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAG 51085
Query 79954 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012
||||| |||||||| | || ||| || ||||| | | | | ||||| || ||
Sbjct 51084 AGATCGGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATG 51026
Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072
||||||| | |||||||||||| | | | ||||| ||||| || || | ||| || ||
Sbjct 51025 ATTCTTTCTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGC 50966
Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132
| | || || || ||||| || || ||||| | ||||| || ||||| || ||||
Sbjct 50965 AAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAAC 50906
Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192
| || |||||| | ||||||||| || ||| ||||| ||||| || ||| ||| |
Sbjct 50905 ACGCAGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGT 50846
Query 80193 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252
|| || || | || ||||| || || || || | || || || | || ||
Sbjct 50845 AGCTCGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACA 50786
Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312
| || | ||||||||||| || || ||||| || || |||| | | || || ||
Sbjct 50785 TGTCTTCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCA 50726
Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372
||||| || || ||||| ||| | || | ||||||||||| || || ||
Sbjct 50725 TGATGACATCTGAGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAA 50666
Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAAT 80432
| || | |||| | ||||| ||||| || || ||||| ||||| ||| ||
Sbjct 50665 GTACTTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGAT 50606
Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492
|| || || |||||||| | |||||| || || | ||||| | |||||| |
Sbjct 50605 ACCAACAGCCACACGCATGATCATGTGTTGTGGGCGCTCAACCACGGCGTTATTAAGACG 50546
Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 80550
| | ||| || ||||| || || || |||||||| | ||| ||||| || ||
Sbjct 50545 GAGGAGGTATGAACGCTCCAATGTCTTGAATCCAAAATATTGGTAGTTGAAA--TCACGA 50488
Query 80551 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATA 80610
||||| | ||| | || ||||| | ||| | ||| | || |||| | | ||
Sbjct 50487 TCGTAGACAATCGCTGAATTGAGCTCTGCCTCGTGTTTCATGAC-ACATTCGT-ATGTCT 50430
Query 80611 CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 80668
|| || || || || || | || ||||| || |||||||| | | | | |||
Sbjct 50429 GTTGAGAGATCATGGGCGATGGCTTGCCATTGCGTGGGTTAACATAATGGTAGAGATCTG 50370
Query 80669 CCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727
|| || || | ||| | || || || | |||||| ||||| || ||||| || |
Sbjct 50369 AGATGAC-GGACGAGAATTGCTTCTTGGTCTGCTTGTGGAGATTGGAAACGGCGATACGA 50311
Query 80728 GCGGCTAAAATGGCATAATCTGGATG 80753
|| || | ||||||||||||||||||
Sbjct 50310 GCCGCGAGAATGGCATAATCTGGATG 50285
>seq24
Length=853129
Score = 107 bits (118), Expect = 3e-18
Identities = 294/442 (67%), Gaps = 10/442 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| ||||| || || || || || || || || || || | | ||| |||||
Sbjct 483141 TTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTC 483200
Query 49729 TCCATGAAATCAAACGGATTGG-TAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787
|||||||| || || || || | | || || || | ||| | | |||| || |
Sbjct 483201 TCCATGAAGTCGAAGGGGTTTGCTGAC-TTGTAG-TATTTCTCGTTACCAAG--AGCCGT 483256
Query 49788 CAA---TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 49843
||| || ||| ||||| || || |||||| ||||| | | | ||||| || |
Sbjct 483257 CAAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAG 483316
Query 49844 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903
|||| | ||| ||||| | || | |||||||| ||||||| || || || || |
Sbjct 483317 TAAGGCACAGGGGA-GAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGA 483375
Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATG 49963
| ||| || | | || || || | ||| || || ||| | | ||||
Sbjct 483376 TGATATCCTGGACAGCCTGTTTGCTTGGGCGGTGCTTCAAGTGAGAAAATAGAAGGCATG 483435
Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023
| || ||| ||||| |||||||| | | || || ||||| ||||| || || || |
Sbjct 483436 CAAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAG 483495
Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTC 50083
||| ||||||||||| || |||||||| || | ||||| || ||| ||||| || |
Sbjct 483496 CCATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGC 483555
Query 50084 CTTCTACTGCGGCAAAGGCAAC 50105
|||| || || || || |||||
Sbjct 483556 CTTCCACGGCAGCGAATGCAAC 483577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263772118400
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