Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq73 237 2e-57 seq24 107 3e-18 >seq73 Length=484926 Score = 237 bits (262), Expect = 2e-57 Identities = 1313/2066 (64%), Gaps = 51/2066 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || |||| | || || ||||| ||||| || || || | Sbjct 52329 GTGAATTGAATAGGCGCACTGGCGGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAG 52270 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||| || ||||||||| || || | ||| | || || || Sbjct 52269 CCAAGCTTCCAGCCAGTGAAATGCATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATG 52210 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || ||||| || || ||||| ||||| || || | ||| |||||||| | | Sbjct 52209 TGAATGTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAGCAGCCATCTGCACA 52150 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || | || | ||| ||||| | || || || | |||||||||| ||| | | Sbjct 52149 ATGTTACGCTGAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATG 52090 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | ||||||| ||||| |||||||| || ||||| | ||||| || | ||| | Sbjct 52089 TTGGGAATATTCTGGATGGAACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGAC 52030 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | | ||| | | | | || || || || || || || || ||||| Sbjct 52029 CAGAGTCCCATATCGACAAGATCCTTGAGAAGCCAAGGGTTCACCACCTGGAACTCTCCT 51970 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | || | |||||| || ||| ||||| || | | || || || Sbjct 51969 GCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCA 51910 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | || || ||| || ||||||||||| || |||| | ||| || | | || Sbjct 51909 AGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCA 51850 Query 79195 TATGATCTGATTTTATCTTTTAGAGAT-TCCCAATCCCAAAGATCAGACGGGACAACATT 79253 | | |||| | | || | || | ||||||||||| ||||| | || || Sbjct 51849 TGTTGCTTGATCTGCTGCTTCA-AGCTATCCCAATCCCAGAGATCTGTAGGAGTGACTCC 51791 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313 ||| | ||||||||| || || || || |||||| ||||| ||||| || Sbjct 51790 CCACATATCATATTGAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATACGG 51731 Query 79314 TCCTTCCTTTTCGGCTAATTC-AC--AACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370 || | | | ||| | || || || || | || |||| || || || || Sbjct 51730 GCCATTAATCTTGGCAAGCTCTACGGAA---GCAGTAAGAGCACCGTGGTAGATAGTCTC 51674 Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TCAAATGGATAATTTA-AGAGA 79428 ||| || | ||||||||| | ||| || ||| | ||||| ||| | | || | Sbjct 51673 GAAGATTTGAATATTGAGATGCTTTGCCTC-AGGTGAGTCAAAAGGAACACGCAGAGCCA 51615 Query 79429 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAA 79488 | ||| || || || ||||| || ||||||| | || || | ||| | || | Sbjct 51614 AGAAA-GCATCCGCCAATCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTT-GCT 51557 Query 79489 ATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGAC 79547 || | || ||||| | || || || |||| ||| || || || || | ||| || Sbjct 51556 CTTCCTTGCCTCTGGGACGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGT 51497 Query 79548 TATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATT-AC 79601 | |||| ||| || || | || || | || ||| | |||| ||| || Sbjct 51496 AACAACTTGGACGACTTCGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCAC 51437 Query 79602 AAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 79661 ||| || | || | ||| |||| || || || || ||||||| ||| | || Sbjct 51436 AAAGGTGGGAAGTGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTA 51377 Query 79662 TTGTATTATTTCAGTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 || | || || ||||| | ||| |||| || ||||| | || | || || Sbjct 51376 TTCGACAATCTCTGTGCACAAGTTGGAGCTACGGATA---GTTCCCAGGTTCTTCTGGTT 51320 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 ||||| ||| ||||||||||| || || ||||| || | ||||| || | || | Sbjct 51319 GCTCTTGCGGTTGCACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGC 51260 Query 79779 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTT---TC 79835 ||| | || | | ||||| | ||||||||| | ||| | ||| || Sbjct 51259 TTCAAGGATGGAATACCAGAGCTTTTGAGCCTTTACGGT---CTTTCGGCCCTTGCCCTC 51203 Query 79836 TCTTTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 | || || || | ||| | || | ||| ||||| ||||| | ||||| ||| ||| Sbjct 51202 GCGCTCATACTTCTCGTACA-AAGC-TTCAAACTCATCTCCGTAGACATCTGCTAGACCA 51145 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 ||||| || | |||||||||| | ||||||||| | | || || | ||||| ||| Sbjct 51144 GGACACTCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAG 51085 Query 79954 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 ||||| |||||||| | || ||| || ||||| | | | | ||||| || || Sbjct 51084 AGATCGGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATG 51026 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||||| | |||||||||||| | | | ||||| ||||| || || | ||| || || Sbjct 51025 ATTCTTTCTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGC 50966 Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | | || || || ||||| || || ||||| | ||||| || ||||| || |||| Sbjct 50965 AAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAAC 50906 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 | || |||||| | ||||||||| || ||| ||||| ||||| || ||| ||| | Sbjct 50905 ACGCAGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGT 50846 Query 80193 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252 || || || | || ||||| || || || || | || || || | || || Sbjct 50845 AGCTCGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACA 50786 Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 | || | ||||||||||| || || ||||| || || |||| | | || || || Sbjct 50785 TGTCTTCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCA 50726 Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372 ||||| || || ||||| ||| | || | ||||||||||| || || || Sbjct 50725 TGATGACATCTGAGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAA 50666 Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAAT 80432 | || | |||| | ||||| ||||| || || ||||| ||||| ||| || Sbjct 50665 GTACTTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGAT 50606 Query 80433 TCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 80492 || || || |||||||| | |||||| || || | ||||| | |||||| | Sbjct 50605 ACCAACAGCCACACGCATGATCATGTGTTGTGGGCGCTCAACCACGGCGTTATTAAGACG 50546 Query 80493 CAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 80550 | | ||| || ||||| || || || |||||||| | ||| ||||| || || Sbjct 50545 GAGGAGGTATGAACGCTCCAATGTCTTGAATCCAAAATATTGGTAGTTGAAA--TCACGA 50488 Query 80551 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATA 80610 ||||| | ||| | || ||||| | ||| | ||| | || |||| | | || Sbjct 50487 TCGTAGACAATCGCTGAATTGAGCTCTGCCTCGTGTTTCATGAC-ACATTCGT-ATGTCT 50430 Query 80611 CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 80668 || || || || || || | || ||||| || |||||||| | | | | ||| Sbjct 50429 GTTGAGAGATCATGGGCGATGGCTTGCCATTGCGTGGGTTAACATAATGGTAGAGATCTG 50370 Query 80669 CCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 80727 || || || | ||| | || || || | |||||| ||||| || ||||| || | Sbjct 50369 AGATGAC-GGACGAGAATTGCTTCTTGGTCTGCTTGTGGAGATTGGAAACGGCGATACGA 50311 Query 80728 GCGGCTAAAATGGCATAATCTGGATG 80753 || || | |||||||||||||||||| Sbjct 50310 GCCGCGAGAATGGCATAATCTGGATG 50285 >seq24 Length=853129 Score = 107 bits (118), Expect = 3e-18 Identities = 294/442 (67%), Gaps = 10/442 (2%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| ||||| || || || || || || || || || || | | ||| ||||| Sbjct 483141 TTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTC 483200 Query 49729 TCCATGAAATCAAACGGATTGG-TAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 |||||||| || || || || | | || || || | ||| | | |||| || | Sbjct 483201 TCCATGAAGTCGAAGGGGTTTGCTGAC-TTGTAG-TATTTCTCGTTACCAAG--AGCCGT 483256 Query 49788 CAA---TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 49843 ||| || ||| ||||| || || |||||| ||||| | | | ||||| || | Sbjct 483257 CAAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAG 483316 Query 49844 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 |||| | ||| ||||| | || | |||||||| ||||||| || || || || | Sbjct 483317 TAAGGCACAGGGGA-GAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGA 483375 Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATG 49963 | ||| || | | || || || | ||| || || ||| | | |||| Sbjct 483376 TGATATCCTGGACAGCCTGTTTGCTTGGGCGGTGCTTCAAGTGAGAAAATAGAAGGCATG 483435 Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023 | || ||| ||||| |||||||| | | || || ||||| ||||| || || || | Sbjct 483436 CAAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAG 483495 Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTC 50083 ||| ||||||||||| || |||||||| || | ||||| || ||| ||||| || | Sbjct 483496 CCATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGC 483555 Query 50084 CTTCTACTGCGGCAAAGGCAAC 50105 |||| || || || || ||||| Sbjct 483556 CTTCCACGGCAGCGAATGCAAC 483577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263772118400