Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq24 132 7e-26 >seq24 Length=853129 Score = 132 bits (146), Expect = 7e-26 Identities = 202/285 (71%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | ||||| || ||||| |||||||||| ||||| | |||||| | ||||| Sbjct 484039 ATCTGGCAGATGTATAAGAAGGCAGAGGCCTCCTTCTGGACCGCCGAAGAAATTGATCTT 483980 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | | | | ||| |||||| | ||| | || Sbjct 483979 TCCAAGGATCTCCACGACTGGAATAACAGACTAAATGATGATGAGCGGTACTTTGTGTCT 483920 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGACACG 125197 ||| || | || ||||| |||| ||| ||||| ||||||||||| || | ||||| || Sbjct 483919 CACGTTCTCGCGTTCTTCGCCGCCTCGGATGGCATCGTCAACGAGAACTTGGTTGA-GCG 483861 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | || || ||||| |||| | || || || || ||||| |||||||| Sbjct 483860 TTTCAGTGGTGAAGTGCAGATTCCTGAGGCGCGTTGTTTCTATGGTTTCCAGATCATGAT 483801 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTA 125302 |||||| | ||||| || | ||||| |||||||||| ||| Sbjct 483800 GGAGAACATCCACTCAGAGACATACTCCCTCCTGATTGACACGTA 483756 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| || | ||||| | ||| | ||||| | | |||| | | Sbjct 483640 AAGAAGGCCGATTGGGCAGTTAGATGGATTCAAGACAAGAAGTCCACCTTCGCCCAACGT 483581 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 |||| |||||||| ||||| || ||||| ||||| ||| |||||| || |||||| Sbjct 483580 TTGGTTGCATTCGCTGCCGTGGAAGGCATTTTCTTCAGTGGTTCTTTTGCAGCTATCTTT 483521 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || |||||| | || ||||| |||||| | || ||||| Sbjct 483520 TGGCTGAAGAAGCGTGGCCTCATGGCTGGTCTGACCTTTTCGAACGAGCTCATCTCTCGT 483461 Query 125547 GACGAGGGCCTACACTGTGACTTTGC 125572 ||||||||||| || |||||||| Sbjct 483460 GACGAGGGCCTGCATACCGACTTTGC 483435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054012585600