Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq46 104 2e-17 >seq46 Length=1090308 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||| || || |||||||| |||||||| || ||| ||| | || || Sbjct 104547 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCA 104606 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || |||||||| | |||| ||| |||||||| |||||||| || ||||| | Sbjct 104607 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGA 104666 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || ||||| || ||| || || | ||| ||||| || Sbjct 104667 ATCTTGGACTTGACGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTG 104726 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| || ||||||||||||||| Sbjct 104727 CCAGTGAGAGTCTTGACAAAAATTTGCATA 104756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || ||| || ||||| |||||||| ||||| | | ||| | || || Sbjct 104318 AACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTC 104377 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||||||| | || | ||| |||||||| ||| || || || || || Sbjct 104378 GAGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTG 104437 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| ||| ||| || | || ||||| ||| || || || ||||||||||| || Sbjct 104438 AATCTTGGACTTCACGTTGTCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCTT 104497 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || ||||| || || || ||||||||| Sbjct 104498 ACCAGTGAGAGTCTTGACGAAGATTTGCATA 104528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176728126960