Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq46 134 3e-26
>seq46
Length=1090308
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||||||||| || || || |||||||| ||||||| || || || || || || |||
Sbjct 104559 GTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCA 104618
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | |||||| || ||||| ||||| || || ||||||||||| | ||
Sbjct 104619 GCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTG 104678
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || | ||| ||||| || || || ||||| ||||| || ||
Sbjct 104679 ACGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTC 104738
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 104739 TTGACAAAAATTTGCAT 104755
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| || || || || ||||| | ||||| || || || || || || ||||| |||
Sbjct 104337 TCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTCGAGCTGCTTGCCAGCGAAA 104396
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||| || || || || || || ||||| |||||||| | || || ||
Sbjct 104397 ATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGAATCTTGGACTTCACGTTG 104456
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||| ||| | || || || | ||||| ||||||||||| || || || ||
Sbjct 104457 TCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACG 104516
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 104517 AAGATTTGCAT 104527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151390138716480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |