Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq46 87.8 2e-12
>seq46
Length=1090308
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || || || |||||||||||||| |||||||| || ||| ||| | |||||
Sbjct 104319 ACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTCG 104378
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
|||||||| || || |||| | |||||| || ||| || | || ||||| || |
Sbjct 104379 AGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGA 104438
Query 48638 ATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||| | | | || ||||| |||| ||||| || | || ||||| |
Sbjct 104439 ATCTTGGACTTCACGTTGTCG--ATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCT 104496
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||| |||||||| || || || || |||||
Sbjct 104497 TACCAGTGAGAGTCTTGACGAAGATTTGCAT 104527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421248324960560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |