Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq46 87.8 2e-12 >seq46 Length=1090308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || || || |||||||||||||| |||||||| || ||| ||| | ||||| Sbjct 104319 ACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTCG 104378 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| || || |||| | |||||| || ||| || | || ||||| || | Sbjct 104379 AGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGA 104438 Query 48638 ATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||| | | | || ||||| |||| ||||| || | || ||||| | Sbjct 104439 ATCTTGGACTTCACGTTGTCG--ATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCT 104496 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| |||||||| || || || || ||||| Sbjct 104497 TACCAGTGAGAGTCTTGACGAAGATTTGCAT 104527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248324960560