Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq51 113 7e-21 seq19 104 4e-18 >seq51 Length=690855 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||||||||| Sbjct 199005 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCAGCTAT 198947 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 198946 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 198906 Score = 100 bits (110), Expect = 4e-17 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 16527 TCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA 16586 ||||| | || |||| ||||||| |||| ||| | |||| |||||| || || | Sbjct 198853 TCTCTCCAGTGATCTACGAAGAGACCCGTGGTGTCCTTAAGACCTTCCTTGAGGGTGTCA 198794 Query 16587 TCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATA 16646 ||| ||||||| || ||| || || ||||| || || ||||||||||| || | ||| Sbjct 198793 TCCGTGATGCTGTCACCTACACTGAACACGCCAAGCGCAAGACTGTCACATCTCTCGATG 198734 Query 16647 TCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||||||| | || || |||||||||| | || ||||| || ||||| Sbjct 198733 TTGTCTATGCCCTCAAGCGCCAAGGCCGTACCCTCTACGGTTTCGGTGGTTAA 198681 >seq19 Length=878005 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| |||||| || ||||| || || || || ||||| ||||| Sbjct 569763 GCCAAGCGCCATCGCAAGAT-TCTTCGTGACAACATTCAGGGTATTACTAAGCCCGCTAT 569821 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || |||||||||||||||||||| ||||||||| |||||| Sbjct 569822 TCGCCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 569862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074687988080