Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq73 405 1e-107 seq24 107 5e-18 >seq73 Length=484926 Score = 405 bits (448), Expect = 1e-107 Identities = 1170/1776 (66%), Gaps = 41/1776 (2%) Strand=Plus/Plus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTG 363445 ||||||| |||| ||||| ||||| || ||||| ||| | ||| | | | Sbjct 50506 ATATTTT-GGATTCAAGACATTGGAGCGTTCATACCTCCTCCGTCTTAATAACGCCGTGG 50564 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 |||| ||||| || || ||| | |||||||| ||| ||||||||||| || ||| ||| Sbjct 50565 TTGAGCGCCCACAACACATGATCATGCGTGTGGCTGTTGGTATCCATGGCGAAGATATTG 50624 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCC 363563 | |||| || || ||||| || ||| | || | | ||| ||||| || || | || Sbjct 50625 AATCCGCAATCGAGACATACAA-CTTG-ATGTCGAACAAGTACTTCACACATGCTTCTCC 50682 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623 ||| | | || ||||||||| | | | | |||||||| || ||||| || || | || Sbjct 50683 TACACTCTTCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGATAT 50742 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 |||||| || ||| || ||||||| ||| || || |||| |||||| | ||||| || Sbjct 50743 GAAGGAAGACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCGAA 50802 Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTC 363742 |||||| || || |||||| | ||||||| | || || || | | |||||| Sbjct 50803 GAATGCCGGTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACTGG-CTCCTACATTT 50861 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 |||||| || | ||||||||| | || || ||||| ||||| || |||| || | Sbjct 50862 CCGGCACCAACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACAG 50921 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | || || || || || ||||| ||||| || || |||||||| || || |||| Sbjct 50922 CCAGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAGC 50981 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || || ||| | || ||||| || || ||| | || || || || |||||| Sbjct 50982 CATGGCACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAAG 51041 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | |||||||| ||||| |||||||| | ||| || | || | || |||||| | || | Sbjct 51042 TTCGTGCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTG 51101 Query 363983 AGGCAGGTAA--GA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 || | || || | ||| | || | || ||| | || ||||| ||||| | |||| Sbjct 51102 AGAAA---AACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATG 51158 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 | | || || || | || ||| | ||||| |||||||| ||||| |||| || | Sbjct 51159 TCTACGGAGATGAGTTTGAAGCTTTGTACGAGAAGTATGAGCGCGAGGGCAAGGGCCGAA 51218 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| | || || ||||| |||| | ||||| | || | || | ||||| |||| Sbjct 51219 AGACCGTAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAA 51278 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 || | ||| | ||||| ||| |||||||||||||| ||||||| || |||| || | Sbjct 51279 ACCCATTCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAA 51338 Query 364220 CAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 | | || | || |||| | || || |||||| | |||||| | || | || ||| | Sbjct 51339 CTA-TCCGTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTT 51397 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACT 364332 || || || ||| | || || || || ||||| | |||| | || |||| ||| Sbjct 51398 GCTGTCTGCAACTTGGCCTCTATTGCACTTCCCACCTTTGTGGATATGAACAATGGGACT 51457 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTT 364392 | |||| |||| | ||| | || || | | || ||| || | ||||| | Sbjct 51458 TATGACTTCCAGAAGCTTCACGAAGTCGTCCAAGTTGTTACCAAGAACTTGAACAAGATC 51517 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 ||||| || || || || | || || || | || | |||||||| || Sbjct 51518 ATCGATGTTAACTACTACCCCGTCCCAGAGGCAAGGAAGAGCAACTTCCGTCATCGTCCC 51577 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATG--GCATTTG 364510 |||| ||||||||||||| | || || | ||| || |||| || | |||| Sbjct 51578 ATTGCAGTTGGTGTACAGGGATTGGCGGATGCTTTCTTG--GCTCTGCGTGTTCCTTTTG 51635 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | || ||||| || ||| |||| | ||||| || || || || | || Sbjct 51636 ACTCACCTGAGGCAAAGCATCTCAATATTCAAATCTTCGAGACTATCTACCACGGTGCTC 51695 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 | |||||||| || | || || | || || ||| || ||||| || |||| Sbjct 51696 TTACTGCTTCCGTAGAGCTTGCCAAGATTAATGGCCCGTATGAGACATATGAAGGATCCC 51755 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 || ||| | ||| | | || | |||| | ||| ||||| || | | | ||| Sbjct 51756 CTGCGTCGAAAGGAGAGCTTCAATATGATATGTGGGGAGTCACTCCTACAGATCTCTGGG 51815 Query 364691 ACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGT 364745 | ||||||| ||| | | | | | ||| | ||||| | |||||| || || || Sbjct 51816 ATTGGGATA-GCTTGAAGCAGC-AGATCAAGCAACATGGCATCCGCAACAGTCTTCTGGT 51873 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || || ||||| || || ||| |||||||| || |||||||||||| || Sbjct 51874 T---GCTCCTATGCCAACTGCCAGCACTAGCCAGATCCTTGGTTTCAACGAGTGCTTTGA 51930 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 || | || ||| |||| || ||||| || ||| | ||||| || | ||| || || Sbjct 51931 GCCATACACCTCCAACATTTACTCCCGCCGTGTGCTTGCAGGAGAGTTCCAGGTGGTGAA 51990 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | || ||||||||||| ||| || || ||| ||||| |||||||||| Sbjct 51991 CCCTTGGCTTCTCAAGGATCTTGTCGATATGGGACTCTGGTCTGACAACATGAAGAACCG 52050 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 || ||||| | | |||||| | ||||| ||||| | ||| |||| | ||| | Sbjct 52051 CATTATCGCTGATGGTGGTTCCATCCAGAATATTCCCAACATCCCATCAGATATTAAGGC 52110 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGCCGA 365042 | | ||||| ||||| ||||| ||||| ||| | ||||| | ||||| || || Sbjct 52111 TCTCTACAAGACCGTCTGGGAGATTTCTCAGCG---TAACATTGTGCAGATGGCTGCTGA 52167 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 || |||||||| || |||| |||||| | ||| | ||||| | || ||| Sbjct 52168 CCGTGGTGCTTTCATTGATCAGTCCCAGTCAATGAACATTCACATGAAGGACCCCACCAT 52227 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAA 365138 | |||| | ||| |||||||||| || ||||| Sbjct 52228 GGGCAAGATCACAAGCATGCATTTCACTGGCTGGAA 52263 >seq24 Length=853129 Score = 107 bits (118), Expect = 5e-18 Identities = 161/224 (72%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATG-AACA-ATGAACGTTCA--TTCGC 22487 || ||||| ||||| |||||||| | | |||||| || | | ||| || || ||||| Sbjct 483646 ATCAAGAAGAAGGCCGATTGGGCAGTTAGATGGATTCAAGACAAGAA-GTCCACCTTCGC 483588 Query 22488 GGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547 ||||| | ||||||| |||| || |||||||||||||| ||| | ||| || Sbjct 483587 CCAACGTTTGGTTGCATTCGCTGCCGTGGAAGGCATTTTCTTCAGTGGTTCTTTTGCAGC 483528 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 ||||||||||| || || |||| | ||| | ||||| || ||||| || ||| | || Sbjct 483527 TATCTTTTGGCTGAAGAAGCGTGGCCTCATGGCTGGTCTGACCTTTTCGAACGAGCTCAT 483468 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTAT 22651 || || ||||| || |||||||| ||||| || | |||| Sbjct 483467 CTCTCGTGACGAGGGCCTGCATACCGACTTTGCATGCCTTCTAT 483424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344248437920