Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq46 86.0 5e-12 >seq46 Length=1090308 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||| ||||||||| |||||||||||| || ||| | ||| Sbjct 104316 AGAACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCC 104375 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || |||| || |||||||||||| || | ||||| || || Sbjct 104376 TCGAGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCT 104435 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | |||||| | | | | |||||| | ||| ||||| ||| ||||| Sbjct 104436 TGAATCTTGGACTTCACGTTGTCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTC 104495 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||| || || ||||| Sbjct 104496 TTACCAGTGAGAGTCTTGACGAAGATTTGCAT 104527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085235274400