Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq24 96.9 4e-15 >seq24 Length=853129 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||||||||| | || ||||| || || || | ||| || || || | Sbjct 483431 GCATGCAAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAG 483490 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| | | || || || ||||| |||||||| || | |||||| |||| || || Sbjct 483491 ACCAGCCATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAA 483550 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 || ||||||||||| || ||||| || | ||||| ||| || | ||| || || | Sbjct 483551 AATGCCTTCCACGGCAGCGAATGCAACCAAACGTTGGGCGAA---GGTGGACTTCTTGTC 483607 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 | |||||| | | ||||||||||| || ||||| || || || Sbjct 483608 TTGAATCCATCTAACTGCCCAATCGGCCTTCTTCTTGATGCAGGG 483652 Score = 96.9 bits (106), Expect = 4e-15 Identities = 180/264 (68%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || || |||| |||||||| || ||||| || |||||||| | || || | ||| Sbjct 483783 TCTGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAACAACGCGCCTCAGGAATC 483842 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 |||||||| | || | ||| || | || || ||||| || ||||| || || || Sbjct 483843 TGCACTTCACCACTGAAACGCTCAACCAAGTTCTCGTTGACGATGCCATCCGAGGCGGCG 483902 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCCCAA 93568 || || || | | || | ||| | ||||||||| || || |||| ||| Sbjct 483903 AAGAACGCGAGAACGTGAGACACAAAGTACCGCTCATCATCATTTAGTCTGTTATTCCAG 483962 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 ||| ||||| || |||||||| | ||||||| | ||||| || || || ||||| || Sbjct 483963 TCGTGGAGATCCTTGGAAAGATCAATTTCTTCGGCGGTCCAGAAGGAGGCCTCTGCCTTC 484022 Query 93629 TTGTACATATCCCATATGTCTTGA 93652 || ||||| | ||| || | |||| Sbjct 484023 TTATACATCTGCCAGATCTGTTGA 484046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856901974400