Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq73 208 1e-48 seq24 150 3e-31 >seq73 Length=484926 Score = 208 bits (230), Expect = 1e-48 Identities = 851/1318 (65%), Gaps = 59/1318 (4%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 |||||||||||| |||||||| | ||||| ||||| ||| | |||| | || || Sbjct 51991 GTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGG 51932 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||| | || ||| || || || ||||| ||||| ||||| ||||| || | || Sbjct 51931 CTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAAC 51872 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266 ||| |||||||| | | ||| || || ||| ||| || ||| || || Sbjct 51871 CAGAAGACTGTTGCGGATGCCATGTTGCTTGAT-------CTG--CTGCTTCAAGCTATC 51821 Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326 ||| || || |||| | | || || |||||||| ||| | || ||| | |||| Sbjct 51820 CCA-ATCCCAGAGATCTGTAGGAGT--GACTCCCCACATATCATATTGAAGCT-CTCCTT 51765 Query 244327 GCTGACG--GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT-TACA 244383 | |||| ||| || || || ||| || || || | || ||| |||| ||| Sbjct 51764 TC-GACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTGGCAAGCTCTACG 51706 Query 244384 GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGG-G 244442 | || || || ||| |||||| ||||||||||| ||| || | | | | Sbjct 51705 GAAGCAGTA-AGAGCACCGTGGTAGATAGTCTCGAAGAT----TTGA--ATATTGAGATG 51653 Query 244443 CCTTGCCGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTG 244497 | ||||| ||||||| | || | | || || ||| | || |||| |||||| Sbjct 51652 CTTTGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCCAAGAAAGCATCCGCCAATCCCTG 51593 Query 244498 CACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTA 244557 || || | | ||||| | || || |||| | | || || || |||||||| Sbjct 51592 TACACCAACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCCTCTGGGACGGGGTA 51533 Query 244558 AAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAG 244617 |||| | ||||| | |||||| | ||| ||| | | ||||||| ||| || Sbjct 51532 GTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGTAACAACTTGGACGACTTCGTGAAG 51473 Query 244618 CAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAG 244677 | ||| ||||| || || ||| | || | || |||||| | || Sbjct 51472 CTTCTGGAAGTCATA-----AG---TCC----CATTGTTCATATCCACAAAGGTGGGAAG 51425 Query 244678 GGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACTGGACAATCT 244736 || | ||||| ||||||||| || ||||| |||| || || ||| | |||||||| Sbjct 51424 TGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGA-GTATTCGACAATCT 51366 Query 244737 CGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGC 244796 | ||||| | ||| || ||| || ||||||| || || ||| |||| ||||| Sbjct 51365 CTGTGCACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 51306 Query 244797 AGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGT 244856 | || ||||||||||||||||| || || |||||| || || | |||| | | Sbjct 51305 ACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAAT 51246 Query 244857 TCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGT 244916 |||||| | |||||| || ||| | || |||||||||| ||| || || Sbjct 51245 ACCAGAGCTTTTGAGCCTTTACGGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGT 51186 Query 244917 ACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACA 244976 ||| || || ||||| || |||| || |||| || || ||| || |||| Sbjct 51185 ACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACA 51126 Query 244977 TGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGG 245036 | || ||||||| ||| | || ||||||| ||||||||| ||||| ||||| | || Sbjct 51125 TCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGG 51066 Query 245037 CCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAA 245096 | | |||||| || | | | || ||| ||| ||||| || || || | | Sbjct 51065 CATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGA 51006 Query 245097 AGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156 | || ||||| || ||||||| ||||| | ||||| ||| | ||| || || ||||||| Sbjct 51005 ACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGT 50946 Query 245157 TGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTAT 245214 | || || || | || ||| ||| | | | |||||| | ||||| | ||||| || Sbjct 50945 TACCACCTTGAT-CAACAT-ATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAAT 50888 Query 245215 GCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGAT 245274 || || ||| ||||||||||| ||||||| ||| | | | || | ||| | Sbjct 50887 ACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTC---GGATTCTG-T 50832 Query 245275 GGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGT 245330 ||| || || | || ||||| | ||| || || | || || |||| | ||| | Sbjct 50831 GGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTAT 50772 Query 245331 CTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388 | || || || |||||||| |||||| | | || ||||| || |||| ||| Sbjct 50771 CATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTG 50714 >seq24 Length=853129 Score = 150 bits (166), Expect = 3e-31 Identities = 355/520 (68%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 |||||||||||||||||||| || ||||| | | ||||| | || | || | | || Sbjct 483652 CCCTGCATCAAGAAGAAGGCCGATTGGGCAGTTAGATGGATTCA-AGACAAGAAGTCCAC 483594 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| | | | |||| || || | ||||| || ||||| |||||| || | || Sbjct 483593 CTTCGCCCAACGTTTGGTTGCATTCGCTGCCGTGGAAGGCATTTTCTTCAGTGGTTCTTT 483534 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || | ||||| ||||| ||| || || || ||| | || || ||||| ||||||| Sbjct 483533 TGCAGCTATCTTTTGGCTGAAGAAGCGTGGCCTC-ATGGCTGGTCTGACCTTTTCGAACG 483475 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | |||||||| ||||||| |||||||| ||||| || || || | Sbjct 483474 AGCTCATCTCTCGTGACGAGGGCCTGCATACCGACTTTGCATGCCTTCTATTTTC---TC 483418 Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 || | | |||| |||| | || || |||| || |||||||| || || || | Sbjct 483417 ACTTGAAGCAC-CGCCCAAGCAAACAGGCTGTCCAGGATATCATCACCGAAGCTGTTGCC 483359 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGA 42988 || ||| | || ||| | || || | || ||| ||| || | ||||||||||| || Sbjct 483358 ATTGAGCAAGAATTCTTAACAGAGGCTCTCCCCTGTG-CCTTACTCGGCATGAACTCCGC 483300 Query 42989 CCTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAG--ATGGGTCT 43045 |||||| |||| || ||| ||| |||||| || | || | || | | | ||| Sbjct 483299 TCTCATGAAGCAA-TATATCGAGTTCGTCGCTGATCGACT--TTTGACGGCTCTTGGTAA 483243 Query 43046 CAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105 | |||||| | | |||||||||||| |||||||| ||||| | | || Sbjct 483242 CGAGAAATACTACAAGTCAGCAAACCCCTTCGACTTCATGGAGAATATCTCACTCGCTGG 483183 Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| || |||||||| || | || |||||| Sbjct 483182 TAAGACCAACTTCTTTGAGAAGCGGGTTGGTGATTACCAG 483143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332589625600