Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq73 208 1e-48
seq24 150 3e-31
>seq73
Length=484926
Score = 208 bits (230), Expect = 1e-48
Identities = 851/1318 (65%), Gaps = 59/1318 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
|||||||||||| |||||||| | ||||| ||||| ||| | |||| | || ||
Sbjct 51991 GTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGG 51932
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || ||| || || || ||||| ||||| ||||| ||||| || | ||
Sbjct 51931 CTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAAC 51872
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266
||| |||||||| | | ||| || || ||| ||| || ||| || ||
Sbjct 51871 CAGAAGACTGTTGCGGATGCCATGTTGCTTGAT-------CTG--CTGCTTCAAGCTATC 51821
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| || || |||| | | || || |||||||| ||| | || ||| | ||||
Sbjct 51820 CCA-ATCCCAGAGATCTGTAGGAGT--GACTCCCCACATATCATATTGAAGCT-CTCCTT 51765
Query 244327 GCTGACG--GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT-TACA 244383
| |||| ||| || || || ||| || || || | || ||| |||| |||
Sbjct 51764 TC-GACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTGGCAAGCTCTACG 51706
Query 244384 GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGG-G 244442
| || || || ||| |||||| ||||||||||| ||| || | | | |
Sbjct 51705 GAAGCAGTA-AGAGCACCGTGGTAGATAGTCTCGAAGAT----TTGA--ATATTGAGATG 51653
Query 244443 CCTTGCCGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTG 244497
| ||||| ||||||| | || | | || || ||| | || |||| ||||||
Sbjct 51652 CTTTGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCCAAGAAAGCATCCGCCAATCCCTG 51593
Query 244498 CACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTA 244557
|| || | | ||||| | || || |||| | | || || || ||||||||
Sbjct 51592 TACACCAACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCCTCTGGGACGGGGTA 51533
Query 244558 AAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAG 244617
|||| | ||||| | |||||| | ||| ||| | | ||||||| ||| ||
Sbjct 51532 GTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGTAACAACTTGGACGACTTCGTGAAG 51473
Query 244618 CAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAG 244677
| ||| ||||| || || ||| | || | || |||||| | ||
Sbjct 51472 CTTCTGGAAGTCATA-----AG---TCC----CATTGTTCATATCCACAAAGGTGGGAAG 51425
Query 244678 GGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG-AGTTGGTGTACTGGACAATCT 244736
|| | ||||| ||||||||| || ||||| |||| || || ||| | ||||||||
Sbjct 51424 TGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGA-GTATTCGACAATCT 51366
Query 244737 CGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGC 244796
| ||||| | ||| || ||| || ||||||| || || ||| |||| |||||
Sbjct 51365 CTGTGCACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGC 51306
Query 244797 AGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGT 244856
| || ||||||||||||||||| || || |||||| || || | |||| | |
Sbjct 51305 ACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAAT 51246
Query 244857 TCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGT 244916
|||||| | |||||| || ||| | || |||||||||| ||| || ||
Sbjct 51245 ACCAGAGCTTTTGAGCCTTTACGGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGT 51186
Query 244917 ACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACA 244976
||| || || ||||| || |||| || |||| || || ||| || ||||
Sbjct 51185 ACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACA 51126
Query 244977 TGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGG 245036
| || ||||||| ||| | || ||||||| ||||||||| ||||| ||||| | ||
Sbjct 51125 TCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGG 51066
Query 245037 CCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAA 245096
| | |||||| || | | | || ||| ||| ||||| || || || | |
Sbjct 51065 CATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGA 51006
Query 245097 AGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156
| || ||||| || ||||||| ||||| | ||||| ||| | ||| || || |||||||
Sbjct 51005 ACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGT 50946
Query 245157 TGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTAT 245214
| || || || | || ||| ||| | | | |||||| | ||||| | ||||| ||
Sbjct 50945 TACCACCTTGAT-CAACAT-ATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAAT 50888
Query 245215 GCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGAT 245274
|| || ||| ||||||||||| ||||||| ||| | | | || | ||| |
Sbjct 50887 ACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTC---GGATTCTG-T 50832
Query 245275 GGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGT 245330
||| || || | || ||||| | ||| || || | || || |||| | ||| |
Sbjct 50831 GGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTAT 50772
Query 245331 CTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388
| || || || |||||||| |||||| | | || ||||| || |||| |||
Sbjct 50771 CATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTG 50714
>seq24
Length=853129
Score = 150 bits (166), Expect = 3e-31
Identities = 355/520 (68%), Gaps = 17/520 (3%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691
|||||||||||||||||||| || ||||| | | ||||| | || | || | | ||
Sbjct 483652 CCCTGCATCAAGAAGAAGGCCGATTGGGCAGTTAGATGGATTCA-AGACAAGAAGTCCAC 483594
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | | | |||| || || | ||||| || ||||| |||||| || | ||
Sbjct 483593 CTTCGCCCAACGTTTGGTTGCATTCGCTGCCGTGGAAGGCATTTTCTTCAGTGGTTCTTT 483534
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| | ||||| ||||| ||| || || || ||| | || || ||||| |||||||
Sbjct 483533 TGCAGCTATCTTTTGGCTGAAGAAGCGTGGCCTC-ATGGCTGGTCTGACCTTTTCGAACG 483475
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| |||||| | |||||||| ||||||| |||||||| ||||| || || || |
Sbjct 483474 AGCTCATCTCTCGTGACGAGGGCCTGCATACCGACTTTGCATGCCTTCTATTTTC---TC 483418
Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929
|| | | |||| |||| | || || |||| || |||||||| || || || |
Sbjct 483417 ACTTGAAGCAC-CGCCCAAGCAAACAGGCTGTCCAGGATATCATCACCGAAGCTGTTGCC 483359
Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGA 42988
|| ||| | || ||| | || || | || ||| ||| || | ||||||||||| ||
Sbjct 483358 ATTGAGCAAGAATTCTTAACAGAGGCTCTCCCCTGTG-CCTTACTCGGCATGAACTCCGC 483300
Query 42989 CCTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAG--ATGGGTCT 43045
|||||| |||| || ||| ||| |||||| || | || | || | | | |||
Sbjct 483299 TCTCATGAAGCAA-TATATCGAGTTCGTCGCTGATCGACT--TTTGACGGCTCTTGGTAA 483243
Query 43046 CAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105
| |||||| | | |||||||||||| |||||||| ||||| | | ||
Sbjct 483242 CGAGAAATACTACAAGTCAGCAAACCCCTTCGACTTCATGGAGAATATCTCACTCGCTGG 483183
Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||| || |||||||| || | || ||||||
Sbjct 483182 TAAGACCAACTTCTTTGAGAAGCGGGTTGGTGATTACCAG 483143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944332589625600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |