Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq24 102 2e-16 >seq24 Length=853129 Score = 102 bits (112), Expect = 2e-16 Identities = 177/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| ||||| |||| | || | |||||| | || ||| | || || | Sbjct 483379 ATCATCACCGAAGCTGTTGCCATTGAGCAAGAATTCTTAACAGAGGCTCTCCCCTGT-GC 483321 Query 243562 CTTATT-GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 |||| | ||||||||||| | |||||| || || ||||| ||||| || || || | Sbjct 483320 CTTACTCGGCATGAACTCCGCTCTCATGAAGCAATATATCGAGTTCGTCGCTGATCGACT 483261 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 ||| | || |||||| | |||||| ||||| || |||||||| | ||| ||||| Sbjct 483260 TTTGACGGCTCTTGGTAACGAGAAATACTACAAGTCAGCAAACCCCTTCGACTTCATGGA 483201 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 | || || || || || || |||||||| || ||||| || ||||||| || Sbjct 483200 GAATATCTCACTCGCTGGTAAGACCAACTTCTTTGAGAAGCGGGTTGGTGATTACCAGAA 483141 Query 243741 CCCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 483140 GGCTGGTGTCATGAA 483126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872086836000