Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq73 168 8e-37
seq24 104 3e-17
>seq73
Length=484926
Score = 168 bits (186), Expect = 8e-37
Identities = 914/1443 (63%), Gaps = 41/1443 (3%)
Strand=Plus/Minus
Query 113587 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 113646
|||| ||| ||||| || ||||| || ||||| | || |||||||| || | |||
Sbjct 52306 GGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATG 52247
Query 113647 CATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706
||| | | |||| | || || | |||| | |||||| ||||| ||
Sbjct 52246 CATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTG 52187
Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 113763
||| ||||| ||||| || || ||||| | |||| || || || ||
Sbjct 52186 ATCAATGAAAGCACCACGGTCAGCAGCCATCTG---CACAATGTTACGCTGAGAAATCTC 52130
Query 113764 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 113823
||| || || ||||||| ||||||||| |||||| | ||||| ||||||||
Sbjct 52129 CCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGA 52070
Query 113824 GCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 113883
||||| | || ||| | | |||||| | | |||||||| || || | ||
Sbjct 52069 ACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATCGACAAG 52010
Query 113884 ATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 113940
||||| |||| || | || || || ||||| || || || || |
Sbjct 52009 ATCCTT---GAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGA 51953
Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000
|| || |||| |||||||||||||||||||| ||| ||| | ||| ||| |||
Sbjct 51952 GTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCT 51893
Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060
||| || ||||| || || | ||||| ||||| |||| || | || | | || | |
Sbjct 51892 GGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTG 51833
Query 114061 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACT 114116
||| | | ||||| || || || || | || | ||| ||||||||| | |
Sbjct 51832 CTTCAAGCTATCCCAATCCCAGA-GATCTGTAGGAGTGACTCCC---CACATATCATATT 51777
Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176
| || |||| || || || ||||| ||| ||||||| || ||||| | || || |
Sbjct 51776 GAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTGG 51717
Query 114177 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 114236
| | || | || || || |||| || || ||||| || || || ||| |
Sbjct 51716 CAAGCTCTACGGAAGCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGA 51657
Query 114237 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA--AATAAATACATCCGCGAG 114294
||| ||||| || ||||| | | || || | || ||| ||||||| |
Sbjct 51656 GATGCTTTGCCTCAGGTGAGTCAAAAGGAACACG-CAGAGCCAAGAAAG-CATCCGCCAA 51599
Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-A 114353
|| || ||||| | |||| || ||||| | | || ||| | || ||| |
Sbjct 51598 TCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCC-TCTGGGA 51540
Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413
|||| || | || |||||| | | | || | || ||||| ||||| | || ||
Sbjct 51539 CGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGTAACAACTTGGACGACTT 51480
Query 114414 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 114473
| |||||||| | | | ||| || | | | | | || ||| | | ||||| || |
Sbjct 51479 CGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAA 51420
Query 114474 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 114533
| || |||| || || |||| ||||||| | | ||| || | ||| || || |
Sbjct 51419 TAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGC 51360
Query 114534 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 114593
|||| || || || || || |||| |||||| || || ||| ||| |||||||
Sbjct 51359 ACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCAT 51300
Query 114594 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 114653
||||||| |||||| |||| | || ||||| ||||| | | || || | | |||||
Sbjct 51299 CCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGA 51240
Query 114654 -CATCGGCGGCTGGCACAGTGGCGTT-GGCTC-GCCCCTCCTCCTCGTACTTTGTGTAGA 114710
| | | | || || || | || ||| | ||||| ||| ||||| ||| |
Sbjct 51239 GCTTTTGAGCCT-TTACGGT--CTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACA 51183
Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770
||||||||||| || || | | |||| || || || || || ||| || | |
Sbjct 51182 AAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCA 51123
Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830
| | ||| | || | |||||| | |||||||||||| || || ||||| | ||
Sbjct 51122 GGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCAT 51063
Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890
|||||||||| || ||| |||| || | || ||||| | | || | || |
Sbjct 51062 AGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAACT 51003
Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG----- 114945
| | || ||| |||||||| || || ||||| | || | | || | ||||
Sbjct 51002 CGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC---AGGACGCTTGT 50946
Query 114946 -ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004
|||| | || | ||||| || |||||| || || || || |||||||| | ||||
Sbjct 50945 TACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATAC 50886
Query 115005 CAT 115007
|||
Sbjct 50885 CAT 50883
>seq24
Length=853129
Score = 104 bits (114), Expect = 3e-17
Identities = 151/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118
|| || ||||||||||| |||||||| || ||||| ||| ||| || | |||||| ||
Sbjct 483447 TGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGCCATGAGGCCA 483506
Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178
|||||||||| ||| || || || ||| ||||| |||||| || || |||||
Sbjct 483507 CGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCCTTCCACGGCA 483566
Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATC 126235
||||| |||| | ||| | || |||| | ||||| |||| || ||| | |
Sbjct 483567 GCGAATGCAACCAAACGTTGGGCGAAGGTG---GACTTCTTGTCTTGAATCCATCTAACT 483623
Query 126236 GCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267
||||| | ||||| |||| ||| || |||||
Sbjct 483624 GCCCAATCGGCCTTCTTCTTGATGCAGGGGAC 483655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349418524800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |