Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq73 168 8e-37 seq24 104 3e-17 >seq73 Length=484926 Score = 168 bits (186), Expect = 8e-37 Identities = 914/1443 (63%), Gaps = 41/1443 (3%) Strand=Plus/Minus Query 113587 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 113646 |||| ||| ||||| || ||||| || ||||| | || |||||||| || | ||| Sbjct 52306 GGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATG 52247 Query 113647 CATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706 ||| | | |||| | || || | |||| | |||||| ||||| || Sbjct 52246 CATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTG 52187 Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 113763 ||| ||||| ||||| || || ||||| | |||| || || || || Sbjct 52186 ATCAATGAAAGCACCACGGTCAGCAGCCATCTG---CACAATGTTACGCTGAGAAATCTC 52130 Query 113764 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 113823 ||| || || ||||||| ||||||||| |||||| | ||||| |||||||| Sbjct 52129 CCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGA 52070 Query 113824 GCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 113883 ||||| | || ||| | | |||||| | | |||||||| || || | || Sbjct 52069 ACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATCGACAAG 52010 Query 113884 ATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 113940 ||||| |||| || | || || || ||||| || || || || | Sbjct 52009 ATCCTT---GAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGA 51953 Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 || || |||| |||||||||||||||||||| ||| ||| | ||| ||| ||| Sbjct 51952 GTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCT 51893 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060 ||| || ||||| || || | ||||| ||||| |||| || | || | | || | | Sbjct 51892 GGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTG 51833 Query 114061 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACT 114116 ||| | | ||||| || || || || | || | ||| ||||||||| | | Sbjct 51832 CTTCAAGCTATCCCAATCCCAGA-GATCTGTAGGAGTGACTCCC---CACATATCATATT 51777 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 | || |||| || || || ||||| ||| ||||||| || ||||| | || || | Sbjct 51776 GAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTGG 51717 Query 114177 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 114236 | | || | || || || |||| || || ||||| || || || ||| | Sbjct 51716 CAAGCTCTACGGAAGCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGA 51657 Query 114237 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA--AATAAATACATCCGCGAG 114294 ||| ||||| || ||||| | | || || | || ||| ||||||| | Sbjct 51656 GATGCTTTGCCTCAGGTGAGTCAAAAGGAACACG-CAGAGCCAAGAAAG-CATCCGCCAA 51599 Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-A 114353 || || ||||| | |||| || ||||| | | || ||| | || ||| | Sbjct 51598 TCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCC-TCTGGGA 51540 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413 |||| || | || |||||| | | | || | || ||||| ||||| | || || Sbjct 51539 CGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGTAACAACTTGGACGACTT 51480 Query 114414 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 114473 | |||||||| | | | ||| || | | | | | || ||| | | ||||| || | Sbjct 51479 CGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAA 51420 Query 114474 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 114533 | || |||| || || |||| ||||||| | | ||| || | ||| || || | Sbjct 51419 TAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGC 51360 Query 114534 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 114593 |||| || || || || || |||| |||||| || || ||| ||| ||||||| Sbjct 51359 ACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCAT 51300 Query 114594 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 114653 ||||||| |||||| |||| | || ||||| ||||| | | || || | | ||||| Sbjct 51299 CCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGA 51240 Query 114654 -CATCGGCGGCTGGCACAGTGGCGTT-GGCTC-GCCCCTCCTCCTCGTACTTTGTGTAGA 114710 | | | | || || || | || ||| | ||||| ||| ||||| ||| | Sbjct 51239 GCTTTTGAGCCT-TTACGGT--CTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACA 51183 Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 ||||||||||| || || | | |||| || || || || || ||| || | | Sbjct 51182 AAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCA 51123 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | | ||| | || | |||||| | |||||||||||| || || ||||| | || Sbjct 51122 GGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCAT 51063 Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890 |||||||||| || ||| |||| || | || ||||| | | || | || | Sbjct 51062 AGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAACT 51003 Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG----- 114945 | | || ||| |||||||| || || ||||| | || | | || | |||| Sbjct 51002 CGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC---AGGACGCTTGT 50946 Query 114946 -ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004 |||| | || | ||||| || |||||| || || || || |||||||| | |||| Sbjct 50945 TACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATAC 50886 Query 115005 CAT 115007 ||| Sbjct 50885 CAT 50883 >seq24 Length=853129 Score = 104 bits (114), Expect = 3e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || ||||||||||| |||||||| || ||||| ||| ||| || | |||||| || Sbjct 483447 TGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGCCATGAGGCCA 483506 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 |||||||||| ||| || || || ||| ||||| |||||| || || ||||| Sbjct 483507 CGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCCTTCCACGGCA 483566 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATC 126235 ||||| |||| | ||| | || |||| | ||||| |||| || ||| | | Sbjct 483567 GCGAATGCAACCAAACGTTGGGCGAAGGTG---GACTTCTTGTCTTGAATCCATCTAACT 483623 Query 126236 GCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||||| | ||||| |||| ||| || ||||| Sbjct 483624 GCCCAATCGGCCTTCTTCTTGATGCAGGGGAC 483655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349418524800