Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq73 143 3e-29
>seq73
Length=484926
Score = 143 bits (158), Expect = 3e-29
Identities = 478/741 (65%), Gaps = 2/741 (0%)
Strand=Plus/Plus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957
|| || || |||| || || ||||| | | |||||||| || || ||||| |
Sbjct 50681 CCTACACTCTTCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGAT 50740
Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017
| |||| ||| ||| || || | || | ||| ||| ||||| | || ||
Sbjct 50741 ATGAAGGAAGACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCG 50800
Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077
|| | || || || || || ||| | ||||| | || || | || ||||||||
Sbjct 50801 AAGAATGCCGGTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACTGGCTCCTACATT 50860
Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137
||| ||||| || ||| || || | || || ||||| || || ||||||||| |
Sbjct 50861 TCCGGCACCAACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACA 50920
Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197
|| | || || || || |||||| | | | ||| | || || |||| || |||
Sbjct 50921 GCCAGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAG 50980
Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257
|| |||||||| || || | ||| |||| || ||||||| || || || ||
Sbjct 50981 CCATGGCACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAA 51040
Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317
| | || | || |||||||| || | ||| | || || || || ||||| | ||
Sbjct 51041 GTTCGTGCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTT 51100
Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377
||||||||| | |||| || | ||||| ||||| ||||| || || | || ||
Sbjct 51101 GAGAAAAACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTC 51160
Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAGGAA 94436
| ||| ||||||| ||||| | || || ||| ||||||||| | | ||
Sbjct 51161 TACGGAGATGAGTTTGAAGCTTTGTACGAGAAGTATGAG-CGCGAGGGCAAGGGCCGAAA 51219
Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496
| | | ||| ||||| ||| || ||| | || | ||| ||||| || |
Sbjct 51220 GACCGTAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAA 51279
Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556
|| | ||| | | |||||| | |||| |||| ||||||| || |||| ||
Sbjct 51280 CCCATTCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAAC 51339
Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616
||| ||||| || ||||||| ||||||||||| || | ||| |||| ||| ||||
Sbjct 51340 TATCCGTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGC 51399
Query 94617 TGTGTGTAACCTGGGCTCCAT 94637
||| || ||| ||| ||| ||
Sbjct 51400 TGTCTGCAACTTGGCCTCTAT 51420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719736937600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |