Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq73 143 3e-29 >seq73 Length=484926 Score = 143 bits (158), Expect = 3e-29 Identities = 478/741 (65%), Gaps = 2/741 (0%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || || |||| || || ||||| | | |||||||| || || ||||| | Sbjct 50681 CCTACACTCTTCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGAT 50740 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||| ||| || || | || | ||| ||| ||||| | || || Sbjct 50741 ATGAAGGAAGACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCG 50800 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | || || || || || ||| | ||||| | || || | || |||||||| Sbjct 50801 AAGAATGCCGGTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACTGGCTCCTACATT 50860 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||| ||||| || ||| || || | || || ||||| || || ||||||||| | Sbjct 50861 TCCGGCACCAACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACA 50920 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || | || || || || |||||| | | | ||| | || || |||| || ||| Sbjct 50921 GCCAGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAG 50980 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| || || | ||| |||| || ||||||| || || || || Sbjct 50981 CCATGGCACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAA 51040 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | || | || |||||||| || | ||| | || || || || ||||| | || Sbjct 51041 GTTCGTGCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTT 51100 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||||||||| | |||| || | ||||| ||||| ||||| || || | || || Sbjct 51101 GAGAAAAACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTC 51160 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAGGAA 94436 | ||| ||||||| ||||| | || || ||| ||||||||| | | || Sbjct 51161 TACGGAGATGAGTTTGAAGCTTTGTACGAGAAGTATGAG-CGCGAGGGCAAGGGCCGAAA 51219 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 | | | ||| ||||| ||| || ||| | || | ||| ||||| || | Sbjct 51220 GACCGTAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAA 51279 Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 || | ||| | | |||||| | |||| |||| ||||||| || |||| || Sbjct 51280 CCCATTCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAAC 51339 Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616 ||| ||||| || ||||||| ||||||||||| || | ||| |||| ||| |||| Sbjct 51340 TATCCGTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGC 51399 Query 94617 TGTGTGTAACCTGGGCTCCAT 94637 ||| || ||| ||| ||| || Sbjct 51400 TGTCTGCAACTTGGCCTCTAT 51420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719736937600