Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq46 113 3e-20
>seq46
Length=1090308
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || ||||| ||||| |||||||| |||||||| || |||| ||| | || ||
Sbjct 104547 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCA 104606
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || |||||||| | |||| |||||||||||| |||||||| |||||||| |
Sbjct 104607 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGA 104666
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || || | || || || || ||| || || | ||| ||||| ||
Sbjct 104667 ATCTTGGACTTGACGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTG 104726
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| || |||||||||||||||
Sbjct 104727 CCAGTGAGAGTCTTGACAAAAATTTGCATA 104756
Score = 95.1 bits (104), Expect = 9e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045
|| ||||| |||||||| ||||| | | ||| | || || | || ||||||||| |
Sbjct 104337 TCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTCGAGCTGCTTGCCAGCGAAA 104396
Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105
|| | |||||||||||| ||| || || ||||| || ||| ||| || || |
Sbjct 104397 ATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGAATCTTGGACTTCACGTTG 104456
Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165
|| || || ||| || || || ||||||||||| ||||| || ||||| || ||
Sbjct 104457 TCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACG 104516
Query 15166 AAAATTTGCATA 15177
|| |||||||||
Sbjct 104517 AAGATTTGCATA 104528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357389560799600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |