Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq46 87.8 2e-12
>seq46
Length=1090308
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||||||||| || || ||||| | ||| ||| || | || || || ||| |
Sbjct 104337 TCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTCGAGCTGCTTGCCAGCGAAA 104396
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|| | || || |||||||| || || || || ||||||||||| || || | || |
Sbjct 104397 ATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGAATCTTGGACTTCA-CGTT 104455
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | ||||||||| ||||| ||||| | |||| || || || || ||||| || ||
Sbjct 104456 GTCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGAC 104515
Query 45329 AAAAATTTGCAT 45340
|| ||||||||
Sbjct 104516 GAAGATTTGCAT 104527
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||| |||||||| || || || || ||| ||| || | ||
Sbjct 104553 TGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCAAGCTGC 104612
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | |||| || || |||||||| ||||| || || || || ||||| ||
Sbjct 104613 TTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTG 104672
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | |||||| || || ||||| || || || | || ||||| ||
Sbjct 104673 GACTTGA-CGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTGCCAGT 104731
Query 45317 TAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351
||||| || |||||||||||||| ||| || ||
Sbjct 104732 GAGAGTCTTGACAAAAATTTGCATACCGCCACGAA 104766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000035977600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |