Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq73 159 4e-34
seq24 120 4e-22
>seq73
Length=484926
Score = 159 bits (176), Expect = 4e-34
Identities = 1103/1754 (63%), Gaps = 43/1754 (2%)
Strand=Plus/Minus
Query 115548 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 115607
|||| ||| ||||| || ||||| || ||||| | || |||||||| || | |||
Sbjct 52306 GGCCATTGTGCGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATG 52247
Query 115608 CATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 115667
||| | | |||| | || || | |||| | |||||| ||||| ||
Sbjct 52246 CATGCTTGTGATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTG 52187
Query 115668 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 115724
||| ||||| || || || || ||||| | |||| || || || ||
Sbjct 52186 ATCAATGAAAGCACCACGGTCAGCAGCCATCTG---CACAATGTTACGCTGAGAAATCTC 52130
Query 115725 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGA 115784
||| || || ||||||| ||||||||| |||||| | ||||| ||||| ||
Sbjct 52129 CCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGA 52070
Query 115785 GCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAG 115844
||||| | || ||| | | |||||| | | |||||||| || || | ||
Sbjct 52069 ACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATCGACAAG 52010
Query 115845 ATCCTCCACGAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 115901
||||| ||| || | || || || ||||| || || || || |
Sbjct 52009 ATCCTT---GAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGA 51953
Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961
|| ||||||| |||||||||||||||||||| ||| ||| | ||| ||| |||
Sbjct 51952 GTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCT 51893
Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021
||| || ||||| || || | ||||| |||||||||| || | | || | |
Sbjct 51892 GGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTG 51833
Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGG 116079
||| | | ||||| || || || || | | | | | ||||||||||| | ||
Sbjct 51832 CTTCAAGCTATCCCAATCCCAGA-GATCTGTAGGAGTGACTC-CCCACATATCATATTGA 51775
Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139
|| |||| ||||| || ||||| ||| |||||||||| ||||| | || || ||
Sbjct 51774 AGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTGGCA 51715
Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199
| || | || || || |||| || || ||||| || || || ||| |
Sbjct 51714 AGCTCTACGGAAGCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGAGA 51655
Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA--AATAAATACATCCGCGAGAC 116257
||| ||||| || ||||| | | ||| || | || ||| ||||||| | |
Sbjct 51654 TGCTTTGCCTCAGGTGAGTCAAAAGGAACACG-CAGAGCCAAGAAAG-CATCCGCCAATC 51597
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACG 116316
| || ||||| | |||| || ||||| | | || ||| | || ||| |||
Sbjct 51596 CCTGTACACCAACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCC-TCTGGGACG 51538
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
|| || | || |||||| | | | || | || ||||| ||||| | || |||
Sbjct 51537 GGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGTAACAACTTGGACGACTTCG 51478
Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436
|||||||| | | | ||| || | | | | | || ||| | | ||||| || ||
Sbjct 51477 TGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAATA 51418
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| |||| || || |||| ||||||| | | ||| || | ||| || || |||
Sbjct 51417 GAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCAC 51358
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
|| || || || || || |||| |||||| || || ||| ||| |||||||||
Sbjct 51357 AAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCATCC 51298
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615
||||||||||| |||| | || ||||| ||||| | | || || | | ||| | |
Sbjct 51297 TTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGAGC 51238
Query 116616 ATCGGCGGCTGGCACAGTGGCGTT-GGCTC-GCCCCTCCTCCTCGTACTTTGTGTAGAGG 116673
| | | || || || | || ||| | ||||| ||| ||||| ||| |
Sbjct 51237 TTTTGAGCCT-TTACGGT--CTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAA 51181
Query 116674 GCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGA 116733
|| |||||||| || || | |||| || || || || || |||||| | ||
Sbjct 51180 GCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCAGG 51121
Query 116734 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 116793
| ||| | || | |||||||| |||||||||||| || || ||||| | || ||
Sbjct 51120 GTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCATAG 51061
Query 116794 AAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 116853
|||||||| || ||| |||| || | || ||||| | | || | || ||
Sbjct 51060 AAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAACTCG 51001
Query 116854 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGA 116907
| || ||| |||||||| || || ||||| | || | | || | |||| |
Sbjct 51000 AAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTG---TTA 50944
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967
||| | || | ||||| || || || ||| || || || |||||||| | ||||||
Sbjct 50943 CCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCA 50884
Query 116968 TCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGT 117025
| || || || || || || || ||| | | |||| || |||||| |
Sbjct 50883 TTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCC--AGTAGCTCGGATTCTGTGGATAT 50826
Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085
| |||||| || || || ||| || || || || | | || | | ||||
Sbjct 50825 TGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATAGA 50766
Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145
| ||||| || ||| |||| | | | ||||||||| ||||| || | | |
Sbjct 50765 TACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTGAGCCTGAG 50706
Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTA 117204
| || ||||| ||||||| || || | || || |||| ||| | | ||||||
Sbjct 50705 GGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAA-GTACTTGTTCGACATCAAG 50647
Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264
| ||| ||||| | | || ||| ||||| || || ||||| | | || |||||
Sbjct 50646 TTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGATACCAACAGCCACACGCATG 50587
Query 117265 AACATGTATTGGGG 117278
| ||||| ||| ||
Sbjct 50586 ATCATGTGTTGTGG 50573
>seq24
Length=853129
Score = 120 bits (132), Expect = 4e-22
Identities = 344/518 (66%), Gaps = 16/518 (3%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || ||||||||||| |||||||| ||||| ||| |||| ||||||||||||
Sbjct 483146 GTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTCTCCAT 483205
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| || || ||||| ||| || | | || | | ||| | | || | ||
Sbjct 483206 GAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAAGAGCCGTCAAA--AGT 483263
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
||||| | |||| |||| || || | ||| | |||||||| |||| | | |
Sbjct 483264 CGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAGTAAGGCA 483323
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| ||||| || || | ||| | | ||||||| | |||||||| | ||| |
Sbjct 483324 CAGGGGAGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGATGATATCC 483383
Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CA-GCAAAC 127525
|| | || | | || | | || | |||| ||| | | | || |||||
Sbjct 483384 TGGACAGCCTGTTTGCTTGGGCGGT-GCTTCAAGTGA-GAAAA-TAGAAGGCATGCAAAG 483440
Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585
|| || || ||||||||||| |||||||| || ||||| ||| |||||| | ||||
Sbjct 483441 TCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGCCATG 483500
Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645
|| || |||||||||| ||| || || || ||| || ||| |||||| || || |||
Sbjct 483501 AGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCCTTCC 483560
Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCAAACCAC 127702
|| ||||| |||| | ||| | ||| |||| ||||| |||| | || |||
Sbjct 483561 ACGGCAGCGAATGCAACCAAACGTTGGGCGAAGG---TGGACTTCTTGTCTTGAATCCAT 483617
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740
| | ||||| | ||||| |||| ||| || |||||
Sbjct 483618 CTAACTGCCCAATCGGCCTTCTTCTTGATGCAGGGGAC 483655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502905449600
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