Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq73 89.7 8e-13
>seq73
Length=484926
Score = 89.7 bits (98), Expect = 8e-13
Identities = 159/227 (70%), Gaps = 5/227 (2%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACA 203894
||||| || || ||||| ||||| |||| ||| | |||| | | | ||||| ||||
Sbjct 52341 TCTTGGTCGACAGTGAATTGAATAGGCG--CACTGGCGGCCATTGTGCGGAGATAATACA 52284
Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954
|||||||||| | ||| || ||| || | |||||| | | |||| || |
Sbjct 52283 TGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGCTTGTGATCTTGCCCATGG 52224
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTG 204014
||||||| |||||||||||||| |||||| || || ||||||| | || || |
Sbjct 52223 TGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAG 52164
Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| ||||| | | |||| | ||| ||||||||||| || ||||||
Sbjct 52163 CAGCCATCTGCACAATGTTACGCTGAGAAATCTCCCAGACGGTCTTG 52117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795149633913600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |