Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq39 122 3e-22 seq46 93.3 2e-13 >seq39 Length=1363582 Score = 122 bits (134), Expect = 3e-22 Identities = 197/283 (70%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| | ||||| || || || |||||||| |||||| || ||||| || ||||| Sbjct 613721 GCAGTTGTCACTGTCCCAGCCTACTTCAATGACCAACAACGTCAGGCAACCAAGGATGCT 613662 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || |||||||| | || ||||| || || | || || || || || || ||||| Sbjct 613661 GGCCAAATTGCTGGCCTGAACGTTCTGCGTGTTGTCAACGAGCCAACTGCCGCCGCTCTT 613602 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || || || || | ||||| | || || || | ||| || | |||| || Sbjct 613601 GCTTACGGTCTTG-------AAAAGGATGAG--GATAAGATCATTGCCGTCTATGATCTT 613551 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561 |||||||||||| |||| ||||| ||| ||| | | || || || || || ||| Sbjct 613550 GGTGGAGGAACTTTCGATATCTCTGTCCTTGAAATCCAGAAGGGAGTGTTCGAGGTCAAG 613491 Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 | ||||||||||||||||| | || ||||| ||| | |||| Sbjct 613490 TCTACCAATGGTGATACTCACTTGGGTGGTGAGGATTTCGATA 613448 Score = 96.9 bits (106), Expect = 1e-14 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || || || ||||| || ||||| || || || || |||| ||| Sbjct 689674 TTCGTCAAGACCCTTACGGGGAAGACTATCACCCTTGAGGTGGAGTCGTCCGATACCATC 689615 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || || || |||||||||||||||||||| || ||||| || || Sbjct 689614 GACAATGTCAAGTCGAAGATCCAGGATAAGGAAGGAATTCCTCCGGACCAACAGCGATTG 689555 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 || ||| | || || ||||| || ||||| |||| || | || || ||||| | ||| Sbjct 689554 ATCTTCGCTGGAAAGCAACTCGAGGATGGCCGAACCCTGTCAGACTACAATATCCAGAAG 689495 Query 391239 G 391239 | Sbjct 689494 G 689494 >seq46 Length=1090308 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || |||||||| || ||||| | || ||||| || || Sbjct 104527 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAGACCATTACCTTGGAAGTTGAGTCGTCC 104468 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || |||||||||||||| || || || || || ||| Sbjct 104467 GACACCATCGACAACGTGAAGTCCAAGATTCAAGATAAGGAGGGTATCCCACCGGACCAA 104408 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | |||||| | || || || || || |||||| |||||||| || || || Sbjct 104407 CAGCGTCTCATTTTCGCTGGCAAGCAGCTCGAGGATGGACGAACTTTGAGCGACTACAAC 104348 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| || || ||||| || Sbjct 104347 ATCCAAAAGGAGAGCACTCTCCACTTGGT 104319 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || ||||| || || || || ||||| || ||||| || Sbjct 104755 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAATCGTCA 104696 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || ||||| || ||||| ||||||||||| || ||| Sbjct 104695 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAA 104636 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || ||||| ||||| ||||| | | || || || Sbjct 104635 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCTGACTACAAC 104576 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || |||||||| || Sbjct 104575 ATCCAAAAAGAATCTACTCTTCACTTGGT 104547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975704224220480