Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq46 152 4e-31 seq59 91.5 1e-12 seq102 87.8 1e-11 >seq46 Length=1090308 Score = 152 bits (168), Expect = 4e-31 Identities = 919/1456 (63%), Gaps = 17/1456 (1%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || ||||||||||| | ||| || || || ||||| || || || || | |||| ||| Sbjct 2842 ATTCCATTGGCATCAAGATCGAAGGTAACCTCAATCTGTGGAACACCACGTGGAGCGGGT 2783 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || || || || || ||| |||||| Sbjct 2782 GGGATACCGGTAAGCTCGAACTTGCCGAGCAAGTTGTTGTCCTTGGTGCGAGCACGTTCA 2723 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | |||||| || ||| || || || || | || | || ||| | Sbjct 2722 CCCTCGAAGACTTGGATGAGCACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACTTCG 2663 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || ||||||| ||| | |||||||| ||||| || Sbjct 2662 GACTTCTTGGTTGGGATAGTAGTGTTTCGGGGAATGAGCTTGGTCATCTGGCCACCAGCA 2603 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| ||||| | || | ||||| | || | || | || | | || Sbjct 2602 GTCTCGATACCGAGAGACAATGGGGCAACATCGAGGAGCAAGATCTCGTTGGTGGACTTG 2543 Query 517572 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | | | | | |||| || ||||| || || | ||||||||| || |||||||| || Sbjct 2542 GAGCTGGTATCACCAGAGAGGATAGCAGCCTGGACAGCAGCACCGTAGGCAACAGCCTCG 2483 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || || | || | || | | || || ||||| |||| | | || | ||| Sbjct 2482 TCGGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAGAAATCGGTGATGAGCT-TCTG 2424 Query 517691 ACCT-TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC-CTGTGATTTAT 517748 | | || ||||| | || || || || | ||||| || || || ||| || || | Sbjct 2423 GATTCTTGGGATACGGGTAGAGCCACCGACGAGGACAATCTCGTGGACGCTG-GACTTGT 2365 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 | | || | ||| || || || || || || ||| | ||| || | ||| Sbjct 2364 CGATCTTAGCATCTTGCAAGACACGCTCGACTGGCTCGAGAGTGGATCTGAAGAGGTCCT 2305 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 |||||||| |||||| | || | || || || | || || |||| || || | Sbjct 2304 GGCAAAGTTCCTCGAATCTGGCACGGGT--GATGGAAGTGTAGAAGTCAACACCCTCATA 2247 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | || || | || || | || |||| | |||||| || | ||| || ||||| || Sbjct 2246 GAGGGAGTCGATCTCGATGGAGGTCTGAGCAGCAGAAGAGAGAGTACGCTTGGCACGCTC 2187 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTTTATATT 517985 || || || | || | || | || ||| | | || | ||| | || || | Sbjct 2186 GCAAGCAGTTCGGAGACGACGGAGAGCACGTGC-GCTAGAGGAGATATCCTTCTTGTACT 2128 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | | |||||| || | || | | || ||||| || || || || |||||||||| Sbjct 2127 TGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCTCCCA 2068 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | |||| || | || | | |||| ||| | || ||||| | | | || | Sbjct 2067 AGTGGGTATCACCAGCAGTGGACTTGACTTCGAAGATACCTTCTTCGATGGTAAGGAGGG 2008 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT 518165 ||||| ||||||||||| | ||| || || || || || || || | Sbjct 2007 AAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGGACGTTTCGCTCACCCTCAACCT 1948 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | || || ||||| || |||| |||||| || || || || || || ||||| | ||| | Sbjct 1947 TCTTGTCGAGACCGTAAGCAATAGCAGCCGCGGTGGGCTCGTTGATGATTCTGAGAACGT 1888 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 | | |||||| || || ||||| || ||||| ||||| || || ||||| || || | Sbjct 1887 TCAAACCAGCGATCAAGCCAGCATCCTTGGTGGCCTGTCTCTGGGAGTCGTTGAAGTAGG 1828 Query 518286 CAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTT 518345 | || || || | ||||| | | || ||||| || || || || | Sbjct 1827 CTGGGACGGTGACGACGGCGTTGTTAACGGTACCACCAAGGTAGGCCTCAGCAGTCTCAC 1768 Query 518346 TCAT-TTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATT- 518403 ||| ||||| || | ||| || || || | |||||| | | ||||||| ||| Sbjct 1767 GCATCTTTACC-AAGACCATGGAAGAGATCTCTTCTGGAGTGAACTGCTTGGTCTCACCC 1709 Query 518404 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTA 518463 |||| || || |||| || || || | || ||| || ||||| ||| Sbjct 1708 TTGAATTGG-ACCTCAATGAGGGGCTTTCCTCCCTTGTCAACAACCTTGAATGGGAAGTG 1650 Query 518464 TTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 |||||||| | || || |||| || || | | ||||| ||||| || ||||| Sbjct 1649 CTTCATATCGGCCTGGACTTCAGGGTCGTTGAACTTGCGGCCAATCAATCGCTTGGCATC 1590 Query 518524 AAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 518583 || | ||| || | || || || || |||||| || || ||||| || |||||| | Sbjct 1589 GAAGACAGTGTTTGCTGCGTTCATGGCGACTTGATTCTTAGCAGCATCACCGATCAGACG 1530 Query 518584 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 518643 || || || || || | ||| | || || || || || ||||| || || || || || Sbjct 1529 CTCCGTATCGGTGAAGGCAACGAACGAGGGCGTCGTTCGGTTACCCTGGTCGTTGGCGAT 1470 Query 518644 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 518703 |||||| | | | ||| | | | ||||||||||| | || ||||| | |||||| Sbjct 1469 AATTTCGATTCTGTCATCTCGAAAGACACCTACACAGGAGTAGGTCGTTCCAAGATCAAT 1410 Query 518704 ACCAATAGCAATTTTA 518719 ||| |||| || ||| Sbjct 1409 ACCTATAGAGATGTTA 1394 >seq59 Length=381799 Score = 91.5 bits (100), Expect = 1e-12 Identities = 205/305 (67%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||| | ||||||||| | || | || | ||||| | || ||| | | Sbjct 336113 TATCGAAATCCTGACCTCCCAAGTGGGTGTCACCGGCGGTAGCCTTAACAGTGAAGACGC 336054 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || | | | ||| |||| ||||| |||||||| || | ||| | || || | Sbjct 336053 CACCCTGGATGTTCAAGAGAGAAACATCGAAAGTTCCACCGCCGAGATCGTAGATGAGAA 335994 Query 518145 CATTCATTTCTTTGTCTTGGTTTTT----ATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 |||| || ||| || | |||| | |||||||||| |||| ||| ||||||||| Sbjct 335993 CATTTCGCTCCTTG-CTGGATTTTCCGGCACCAAGACCATAAGCAATAGCGGCAGCAGTT 335935 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || || || || || | | ||| || |||||||| || || |||||||| || ||| Sbjct 335934 GGCTCGTTGATGATACGGAGAACGTTGAGACCAGCGATGGCACCAGCATCTTTGGTAGCT 335875 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTT 518319 || | || ||||| || || ||||| ||||| || || || | || | |||||| Sbjct 335874 TGACGCTGGTTGTCGTTGAAGTAGGCAGGGACAGTGATGACAGCCTTGGTGACCTTCTTG 335815 Query 518320 ACCAA 518324 |||| Sbjct 335814 CCCAA 335810 >seq102 Length=335414 Score = 87.8 bits (96), Expect = 1e-11 Identities = 163/236 (69%), Gaps = 5/236 (2%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| || || ||||||||| | | || || ||||||||||||||||| || | ||| Sbjct 9331 TTAAG-GGAAAGGAAGGTCGTCTGCGTGGTAACTTGATGGGAAAACGTGTTGACTTTTCT 9389 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 |||||||| || ||||| ||| || || | | | ||||||| ||||||||| Sbjct 9390 GCACGTACTGTCATTACAGGTGACCCTAACTTATCCTTGGATGAAGTCGGTGTTCCTAGG 9449 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | |||||||| || || |||| | |||| || || | | ||||||| | | || Sbjct 9450 AGTATTGCTAGAACACTGACTTATCCGGAAACGGTTACTCCATACAATATTGGGAAACTG 9509 Query 669029 ACTCAATTAGTGAAAAATGGT--AAAAGAGTATATCCGGGTGCCAATTTTGTAATC 669082 ||| | || | |||||| || ||| ||||||| || || | ||| ||| Sbjct 9510 CACCAACTTGTTCAGAATGGTCCCAACGAG--CATCCGGGAGCTAAATATGTTATC 9563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780794610955360