Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq46 430 2e-115
seq105 147 3e-30
seq39 123 3e-23
seq73 107 2e-18
>seq46
Length=1090308
Score = 430 bits (476), Expect = 2e-115
Identities = 1050/1585 (66%), Gaps = 11/1585 (1%)
Strand=Plus/Minus
Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624
||| |||||||| || || ||||| || || || | ||| || || || || ||
Sbjct 2981 CTTCTCATCTTCCTCCTTGTACTTCTCGGCCTCAGCCAACATGCGCTCGATTTCCTCCTT 2922
Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684
|| | | ||||| || || | || |||||| | ||| || || | | |||| ||
Sbjct 2921 GGAGAGACGGCCCTTGTCGTTGGAGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTC 2862
Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744
|||| || |||| || ||||| ||||||| |||||| | || | ||| |||||
Sbjct 2861 AAGAGCAGAGACGTTCATGATTCCATTGGCATCAAGATCGAAGGTAACCTCAATCTGTGG 2802
Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
||| | || |||| ||| ||||| || | || || | || || || |||| ||
Sbjct 2801 AACACCACGTGGAGCGGGTGGGATACCGGTAAGCTCGAACTTGCCGAGCAAGTTGTTGTC 2742
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864
| | | ||||||||| || |||||| || ||| |||| || || ||
Sbjct 2741 CTTGGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGCTGGTTGTCGGA 2682
Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924
|| ||||||| || ||||| | ||| || || || |||| ||||| | |
Sbjct 2681 GAAGGTGGAGAAGACTTCGGACTTCTTGGTTGGGATAGTAGTGTTTCGGGGAATGAGCTT 2622
Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984
|||||| ||||| ||| |||| || ||||||| || | || || | ||| ||
Sbjct 2621 GGTCATCTGGCCACCAGCAGTCTCGATACCGAGAGACAATGGGGCAACATCGAGGAGCAA 2562
Query 6985 CAGGTCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041
| || | || | | | ||||| | | ||| || || ||||| | ||
Sbjct 2561 GATCTCGTTGGTGGACTTGGAGCTGGTATCACCAGAGAGGATAGCAGCCTGGACAGCAGC 2502
Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101
||||| || || ||||| |||||||| || | || || | || || ||||| || |
Sbjct 2501 ACCGTAGGCAACAGCCTCGTCGGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAGAA 2442
Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161
||| | | | | || ||| | ||||| || || || |||||||| | || || ||
Sbjct 2441 ATCGGTGATGAGCTTCTGGATTCTTGGGATACGGGTAGAGCCACCGACGAGGACAATCTC 2382
Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221
| || | || || |||||||| | ||| | | ||||| || || | |
Sbjct 2381 GTGGACGCTGGACTTGTCGATCTTAGCATCTTGCAAGACACGCTCGACTGGCTCGAGAGT 2322
Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281
| ||| | |||| || |||||||| || | |||||||| ||||| || |||||
Sbjct 2321 GGATCTGAAGAGGTCCTGGCAAAGTTCCTCGAATCTGGCACGGGTGATGGAAGTGTAGAA 2262
Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341
||||| || || || | || || || || |||| || || || | ||||| | ||
Sbjct 2261 GTCAACACCCTCATAGAGGGAGTCGATCTCGATGGAGGTCTGAGCAGCAGAAGAGAGAGT 2202
Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401
||||| || ||||| || || ||||| | |||||| || ||||| | | || ||| ||
Sbjct 2201 ACGCTTGGCACGCTCGCAAGCAGTTCGGAGACGACGGAGAGCACGTGCGCTAGAGGAGAT 2142
Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461
||| ||||| | || || || ||||| | |||||| | ||| | |||||
Sbjct 2141 ATCCTTCTTGTACTTGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGACGGTTGTCGAA 2082
Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521
|| ||||| |||||||| ||||| || || || | |||||||| ||||||||| ||||
Sbjct 2081 GTCCTCACCTCCCAAGTGGGTATCACCAGCAGTGGACTTGACTTCGAAGATACCTTCTTC 2022
Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581
||| | | | |||||||| || || |||||||| || || || ||||| |||||
Sbjct 2021 GATGGTAAGGAGGGAAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGGACGTTTCG 1962
Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641
|| | || ||||| ||||||||||| || ||||| ||||| || || || || ||
Sbjct 1961 CTCACCCTCAACCTTCTTGTCGAGACCGTAAGCAATAGCAGCCGCGGTGGGCTCGTTGAT 1902
Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701
|| | ||| ||||| ||||| || | ||||| || || || |||| || ||
Sbjct 1901 GATTCTGAGAACGTTCAAACCAGCGATCAAGCCAGCATCCTTGGTGGCCTGTCTCTGGGA 1842
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
||||| |||||||| ||||| || ||||| |||| | || | ||| || || |
Sbjct 1841 GTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTTGTTAACGGTACCACCAAGGTAGGC 1782
Query 7762 TTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACT 7820
|| || | || ||| ||| ||| ||||| || || |||||||| | | ||||
Sbjct 1781 CTCAGCAGTCTCACGCATCTTTACCAAG-ACCATGGAAGAGATCTCTTCTGGAGTGAACT 1723
Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880
| || || ||||| || || | || ||||| | ||| || ||| | | | | ||
Sbjct 1722 GCTTGGTCTCACCCTTGAATTGGACCTCAATGAGGGGCTT-TCCTC--CCTTGTCAACAA 1666
Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940
|||| | | | | ||||||||| | ||||| | |||| ||||| | || |
Sbjct 1665 CCTTGAATGGGAAGTGCTTCATATCGGCCTGGACTTCAGGGTCGTTGAACTTGCGGCCAA 1606
Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000
| | ||||| ||||| || || |||||| | ||||||||| ||| ||||| || |
Sbjct 1605 TCAATCGCTTGGCATCGAAGACAGTGTTTGCTGCGTTCATGGCGACTTGATTCTTAGCAG 1546
Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060
| || ||||| ||||| || || || || || || ||| |||| || |||||||| |
Sbjct 1545 CATCACCGATCAGACGCTCCGTA---TCGGTGAAGGCAACGAACGAGGGCGTCGTTCGGT 1489
Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120
| || |||||||| || |||||||| | | ||| | | | |||| || || || || |
Sbjct 1488 TACCCTGGTCGTTGGCGATAATTTCGATTCTGTCATCTCGAAAGACACCTACACAGGAGT 1429
Query 8121 ACGTTGTTCCTAAATCAATACCGAT 8145
| || ||||| | ||||||||| ||
Sbjct 1428 AGGTCGTTCCAAGATCAATACCTAT 1404
>seq105
Length=247759
Score = 147 bits (162), Expect = 3e-30
Identities = 240/340 (71%), Gaps = 7/340 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||||| |||||| || | |||
Sbjct 111253 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTCGAAAGGACTTCGAACACACCA 111194
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | || ||||| || || || ||||| || || | || | |
Sbjct 111193 CGGTCGATGGAAAGAAGGGAGACATCGAAAGTTCCTCCACCGAGATCGTA---GACAATG 111137
Query 7577 TTCGTATCGT-CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | ||| | | | ||||||| || |||||||| ||||| || |||||||| ||
Sbjct 111136 ATC-TGGCGTTCACCCTCAGTCTTATCCAGGCCGTACGCAATAGCGGCAGCCGTTGGCTC 111078
Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
|| | ||||| || ||| |||| || |||||||| | ||||| || || || ||||
Sbjct 111077 GTTGACGATACGCAGGACA-TTCAATCCGGCAATAGTACCAGCATCCTTGGTGGCCTGTC 111019
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
|| |||||||||||||| ||||| || || || |||| ||||| ||||| || |
Sbjct 111018 TCTGGTTGTCGTTAAAGTAGGCAGGGACAGTGACCACTGCGTGAGTGACCTTCTTGCCCA 110959
Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|| || || |||| || ||||| ||| ||| |||||
Sbjct 110958 AGTAAGACTCTGCGACCTCCTTCATCTTGCCAAGGACCAT 110919
>seq39
Length=1363582
Score = 123 bits (136), Expect = 3e-23
Identities = 231/331 (70%), Gaps = 14/331 (4%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| ||||| || ||| | ||||| || || | ||
Sbjct 613449 ATCGAAATCCTCACCACCCAAGTGAGTATCACCATTGGTAGACTTGACCTCGAACACTCC 613508
Query 7516 TCCTTCAATGTTT-AACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| ||| || || || | ||| || || || ||||| || ||| | | |
Sbjct 613509 --CTTCTGGATTTCAAGGACAGAGATATCGAAAGTTCCTCCACCAAGATCATAGACGGCA 613566
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | || |||| || || ||| || |||||||| || | ||| || || |||||
Sbjct 613567 ATGATCTTATCCTCATC------CTTTTCAAGACCGTAAGCAAGAGCGGCGGCAGTTGGC 613620
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTG 7692
|| || | || ||| ||| ||||||||||||||| | ||| ||||| || || || ||
Sbjct 613621 TCGTTGACAACACGCAGAACGTTCAGGCCAGCAAT-TTGGCCAGCATCCTTGGTTGCCTG 613679
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTT-TCTTAC 7751
||||| || || |||||||| ||||| || || || |||| | ||| || ||| |
Sbjct 613680 ACGTTGTTGGTCATTGAAGTAGGCTGGGACAGTGACAACTGCGTTC-TGAATTGGCTTGC 613738
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782
||| || ||||| || | || ||||| ||
Sbjct 613739 TGAGGTAGGATTCAGCAGTCTCCTTCATCTT 613769
>seq73
Length=484926
Score = 107 bits (118), Expect = 2e-18
Identities = 398/618 (64%), Gaps = 17/618 (3%)
Strand=Plus/Minus
Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522
|| || |||||||| | | |||||||||| | ||||| || |||| ||||| |
Sbjct 51198 TCATACTTCTCGTACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACAC 51139
Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582
| || ||||| | || | ||| | || | ||||| | |||||||| | |||
Sbjct 51138 TCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCG 51079
Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642
|||||||||| ||| | ||||| || || | | || || | ||| ||||||
Sbjct 51078 GGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTT 51019
Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGAC 105702
| | ||||| || |||| | ||| ||||||||||| || | |||| |||| || |
Sbjct 51018 CTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAA-AGGC 50960
Query 105703 CCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGT 105756
| | ||||| || |||||| |||||||| || || ||| | || ||
Sbjct 50959 AC--CAGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGC 50902
Query 105757 AACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCA 105816
| |||||| | |||||||| || || || || || ||| | || | | ||
Sbjct 50901 AGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCT 50842
Query 105817 CGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATACGCGCACAC 105873
|| | ||| | | | ||||| || || || ||| | | ||| |||||
Sbjct 50841 CGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATA---GCACAT 50785
Query 105874 TCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACAC 105933
|| | ||||| || ||||| || || || |||||||| | | | ||||| ||
Sbjct 50784 GTCTTCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCAT 50725
Query 105934 GATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992
|||||||| || | ||| || || |||||| |||| || || || | ||||| ||||
Sbjct 50724 GATGACATCTG-AGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAA 50666
Query 105993 CAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAAT 106052
| ||||| | | | |||||| || | || |||||||| | ||||| ||
Sbjct 50665 GTACTTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGAT 50606
Query 106053 ACCAATAGCGACGCGCAT 106070
||||| ||| || |||||
Sbjct 50605 ACCAACAGCCACACGCAT 50588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635128354070400
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