Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq73 215 6e-51
seq16 98.7 1e-15
seq24 96.9 4e-15
>seq73
Length=484926
Score = 215 bits (238), Expect = 6e-51
Identities = 903/1399 (65%), Gaps = 41/1399 (3%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
|||||| ||||| ||||||| || || | ||||||||||| ||||||||||| || |
Sbjct 50572 CCCACAACACATGATCATGCGTGTGGCTGTTGGTATCCATGGCGAAGATATTGAATCCGC 50631
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||||||| || |||||| ||| |||| || || | || || ||||
Sbjct 50632 AATCGAGACATACAACTTGATGTCGAACAAGTAC-TTCACACATGCTTCTCCTACACTCT 50690
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||| ||||| || || | || ||||| || ||||| | | | ||||| |
Sbjct 50691 TCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGATATGAAGGAAG 50750
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| || |||| || || | || || | |||||| || || ||| || |
Sbjct 50751 ACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCGAAGAATGCCG 50810
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
|||| || || | | ||||| || |||| | | ||| || || || ||
Sbjct 50811 GTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACT--GGCTCCTACATTTCCGGCAC 50868
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| ||| || |||||||| | |||||||| || || || ||| |||||| | ||
Sbjct 50869 CAACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACAGCCAGATA 50928
Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATG 112021
||| | |||| ||| | |||| | || | || |||| |||||||||||
Sbjct 50929 TGTTGATCAAGGTGG---TAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAGCCATG 50985
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
|||||| ||| || | |||||||| || | | || || ||| | ||||| | |
Sbjct 50986 GCACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAAGTTC- 51044
Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
|||| ||||||||||||| || | |||||||| ||||||||||||||||| ||||||
Sbjct 51045 GTGCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTGAGA 51104
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
| | || | ||| | || | |||||| | || || ||||| | |||| | |
Sbjct 51105 AAAACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTCTACG 51164
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GA-AGAAAGTCGGGCGACTGCG 112256
| || ||||||||||| | ||| ||||| ||| || | ||| || ||| |
Sbjct 51165 GAGATGAGTTTGAAGCTTTGTACGAGAAGTATGAGCGCGAGGGCAAG--GGCCGA--AAG 51220
Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316
|| || ||| | | ||| | | || || | | |||||||||||||| |
Sbjct 51221 ACCGTAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAAC 51280
Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376
|||| ||||| ||||| || || || |||| ||||| || || ||||| ||||
Sbjct 51281 CCATTCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACT 51340
Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436
||| || |||||| | || ||||| || | |||| || |||||| |||
Sbjct 51341 ATCCGTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGCT 51400
Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACAT 112494
|| || ||| | || || || || || |||| | ||||||| | |||| ||| |
Sbjct 51401 GTCTGCAACTTGGCCTCTATTGCACTTCCCACCTTTGTGGAT--ATGAACAATGGGACTT 51458
Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554
||| | | || || |||||||| || ||| || || ||| | |||| | |
Sbjct 51459 ATGACTTCCAGAAGCTTCACGAAGTCGTCCAAGTTGTTACCAAGAACTTGAACAAGATCA 51518
Query 112555 TTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613
| ||| || | |||||||| ||| || | || || | | || |||||
Sbjct 51519 TCGATGTTAACTACTACCCCGTCCCAGA-GGCAAGGAAGAGCAACTTCCGTCATCGTCCC 51577
Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 112672
|||| | ||||| || || | ||||||| ||| | || || || | |||||
Sbjct 51578 ATTGCAGTTGGTGTACAGGGATTGGCGGATGCTTTCTTGGCTCTG-CGTGTTCCTTTTGA 51636
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|| || || ||| | ||||| | || || ||||| || || |||| |||||
Sbjct 51637 CTCACCTGAGGCAAAGCATCTCAATATTCAAATCTTCGAGACTATCTACCACGGTGCTCT 51696
Query 112733 TGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790
| || | || ||| | || || || |||| || ||||| || | ||| || ||
Sbjct 51697 TACTGC--TTCCGTAGAGCTTGCCAAGATTAATGGCCCGTATGAGACATATGAAGGATCC 51754
Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC-AAGCTTCACTA 112849
|| || || |||| | |||||||| ||||||||||| | || | || | || ||
Sbjct 51755 CCTGCGTCGAAAGGAGAGCTTCAATATGATATGTGGGGA-GTCACTCCTACAGATCTCTG 51813
Query 112850 CGACTGGGA-CGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908
|| ||||| ||| | ||| | | |||||| | | || | || ||||||||| ||
Sbjct 51814 GGATTGGGATAGCT-TGAAGCAGCAGATCAAGCAACATGGCATCCGCAACAGTCTTCTGG 51872
Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968
| || || |||||||| ||| ||| || ||| | ||| || || |||||||| |
Sbjct 51873 TTGCTCCTATGCCAACTGCCAGCACTAGCCAGATCCTTGGTTTCAACGAGTGCTTTGAGC 51932
Query 112969 CCTACACGACGAACATCTA 112987
| ||||| | ||||| ||
Sbjct 51933 CATACACCTCCAACATTTA 51951
>seq16
Length=379189
Score = 98.7 bits (108), Expect = 1e-15
Identities = 276/416 (66%), Gaps = 16/416 (4%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
||||| || || || || || | |||||| | ||| |||| ||| | |||||| |
Sbjct 192897 CGATCGAAACGTCCAGGACGCATGAGCGCTTTATCCAGGACATCTGGTCTATTCGTACCA 192838
Query 15945 GCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002
|| | ||| || | | |||| || ||| ||||||||||| || ||||| | ||| |
Sbjct 192837 GCAAGGACCACGA--CTTGTTCCGAAGTATTGAAACCATCCATTTCAGTCAAGATCTGAT 192780
Query 16003 TAATAGTTTGTTCCCGTTCATCATT-----CGCTGGCATA-CCACCAGCACTGCGTTGCT 16056
| | || ||| |||||||| | ||||| | || || | || |
Sbjct 192779 TGAGGGTGGCTTCTCGTTCATCCGTTCCACCGCTGAAGTTGCCGCCTTTGCCACGAGATT 192720
Query 16057 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACT 16115
| || | |||||||||||||| ||||||| ||||||||| || | || | |||
Sbjct 192719 TACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTT-CTTGCGGTA 192661
Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 16173
| ||||||||||| || | ||| || ||||| || ||||| ||||| || | |
Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601
Query 16174 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233
| || || | || ||||||||| | || ||||| || | || ||| || ||||
Sbjct 192600 CCGCTGACGCT--GAAGAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543
Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289
||||||| ||||| || || | | || || ||||| || |||||||| |||
Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487
>seq24
Length=853129
Score = 96.9 bits (106), Expect = 4e-15
Identities = 93/117 (79%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 102262
|| || || || |||||| |||||| || ||| ||||| | |||||| |||||||| ||
Sbjct 483562 GTGGAAGGCATTTTCTTCAGTGGTTCTTT-TGCAGCTATCTTTTGGCTGAAGAAGCGTGG 483504
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319
|||||| | ||||| ||| || |||||||| ||||||||||||||||| || ||
Sbjct 483503 CCTCATGGCTGGTCTGACCTTTTCGAACGAGCTCATCTCTCGTGACGAGGGCCTGCA 483447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738054803200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |