Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq73 215 6e-51 seq16 98.7 1e-15 seq24 96.9 4e-15 >seq73 Length=484926 Score = 215 bits (238), Expect = 6e-51 Identities = 903/1399 (65%), Gaps = 41/1399 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| ||||| ||||||| || || | ||||||||||| ||||||||||| || | Sbjct 50572 CCCACAACACATGATCATGCGTGTGGCTGTTGGTATCCATGGCGAAGATATTGAATCCGC 50631 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||||||| || |||||| ||| |||| || || | || || |||| Sbjct 50632 AATCGAGACATACAACTTGATGTCGAACAAGTAC-TTCACACATGCTTCTCCTACACTCT 50690 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||| ||||| || || | || ||||| || ||||| | | | ||||| | Sbjct 50691 TCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGATATGAAGGAAG 50750 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || |||| || || | || || | |||||| || || ||| || | Sbjct 50751 ACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCGAAGAATGCCG 50810 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907 |||| || || | | ||||| || |||| | | ||| || || || || Sbjct 50811 GTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACT--GGCTCCTACATTTCCGGCAC 50868 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| || |||||||| | |||||||| || || || ||| |||||| | || Sbjct 50869 CAACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACAGCCAGATA 50928 Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATG 112021 ||| | |||| ||| | |||| | || | || |||| ||||||||||| Sbjct 50929 TGTTGATCAAGGTGG---TAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAGCCATG 50985 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| ||| || | |||||||| || | | || || ||| | ||||| | | Sbjct 50986 GCACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAAGTTC- 51044 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 |||| ||||||||||||| || | |||||||| ||||||||||||||||| |||||| Sbjct 51045 GTGCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTGAGA 51104 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | | || | ||| | || | |||||| | || || ||||| | |||| | | Sbjct 51105 AAAACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTCTACG 51164 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GA-AGAAAGTCGGGCGACTGCG 112256 | || ||||||||||| | ||| ||||| ||| || | ||| || ||| | Sbjct 51165 GAGATGAGTTTGAAGCTTTGTACGAGAAGTATGAGCGCGAGGGCAAG--GGCCGA--AAG 51220 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || || ||| | | ||| | | || || | | |||||||||||||| | Sbjct 51221 ACCGTAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAAC 51280 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 |||| ||||| ||||| || || || |||| ||||| || || ||||| |||| Sbjct 51281 CCATTCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACT 51340 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || |||||| | || ||||| || | |||| || |||||| ||| Sbjct 51341 ATCCGTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGCT 51400 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACAT 112494 || || ||| | || || || || || |||| | ||||||| | |||| ||| | Sbjct 51401 GTCTGCAACTTGGCCTCTATTGCACTTCCCACCTTTGTGGAT--ATGAACAATGGGACTT 51458 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 ||| | | || || |||||||| || ||| || || ||| | |||| | | Sbjct 51459 ATGACTTCCAGAAGCTTCACGAAGTCGTCCAAGTTGTTACCAAGAACTTGAACAAGATCA 51518 Query 112555 TTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 | ||| || | |||||||| ||| || | || || | | || ||||| Sbjct 51519 TCGATGTTAACTACTACCCCGTCCCAGA-GGCAAGGAAGAGCAACTTCCGTCATCGTCCC 51577 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 112672 |||| | ||||| || || | ||||||| ||| | || || || | ||||| Sbjct 51578 ATTGCAGTTGGTGTACAGGGATTGGCGGATGCTTTCTTGGCTCTG-CGTGTTCCTTTTGA 51636 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 || || || ||| | ||||| | || || ||||| || || |||| ||||| Sbjct 51637 CTCACCTGAGGCAAAGCATCTCAATATTCAAATCTTCGAGACTATCTACCACGGTGCTCT 51696 Query 112733 TGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 | || | || ||| | || || || |||| || ||||| || | ||| || || Sbjct 51697 TACTGC--TTCCGTAGAGCTTGCCAAGATTAATGGCCCGTATGAGACATATGAAGGATCC 51754 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC-AAGCTTCACTA 112849 || || || |||| | |||||||| ||||||||||| | || | || | || || Sbjct 51755 CCTGCGTCGAAAGGAGAGCTTCAATATGATATGTGGGGA-GTCACTCCTACAGATCTCTG 51813 Query 112850 CGACTGGGA-CGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 || ||||| ||| | ||| | | |||||| | | || | || ||||||||| || Sbjct 51814 GGATTGGGATAGCT-TGAAGCAGCAGATCAAGCAACATGGCATCCGCAACAGTCTTCTGG 51872 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || |||||||| ||| ||| || ||| | ||| || || |||||||| | Sbjct 51873 TTGCTCCTATGCCAACTGCCAGCACTAGCCAGATCCTTGGTTTCAACGAGTGCTTTGAGC 51932 Query 112969 CCTACACGACGAACATCTA 112987 | ||||| | ||||| || Sbjct 51933 CATACACCTCCAACATTTA 51951 >seq16 Length=379189 Score = 98.7 bits (108), Expect = 1e-15 Identities = 276/416 (66%), Gaps = 16/416 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 ||||| || || || || || | |||||| | ||| |||| ||| | |||||| | Sbjct 192897 CGATCGAAACGTCCAGGACGCATGAGCGCTTTATCCAGGACATCTGGTCTATTCGTACCA 192838 Query 15945 GCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | ||| || | | |||| || ||| ||||||||||| || ||||| | ||| | Sbjct 192837 GCAAGGACCACGA--CTTGTTCCGAAGTATTGAAACCATCCATTTCAGTCAAGATCTGAT 192780 Query 16003 TAATAGTTTGTTCCCGTTCATCATT-----CGCTGGCATA-CCACCAGCACTGCGTTGCT 16056 | | || ||| |||||||| | ||||| | || || | || | Sbjct 192779 TGAGGGTGGCTTCTCGTTCATCCGTTCCACCGCTGAAGTTGCCGCCTTTGCCACGAGATT 192720 Query 16057 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACT 16115 | || | |||||||||||||| ||||||| ||||||||| || | || | ||| Sbjct 192719 TACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTT-CTTGCGGTA 192661 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 16173 | ||||||||||| || | ||| || ||||| || ||||| ||||| || | | Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601 Query 16174 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233 | || || | || ||||||||| | || ||||| || | || ||| || |||| Sbjct 192600 CCGCTGACGCT--GAAGAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543 Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289 ||||||| ||||| || || | | || || ||||| || |||||||| ||| Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487 >seq24 Length=853129 Score = 96.9 bits (106), Expect = 4e-15 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 102262 || || || || |||||| |||||| || ||| ||||| | |||||| |||||||| || Sbjct 483562 GTGGAAGGCATTTTCTTCAGTGGTTCTTT-TGCAGCTATCTTTTGGCTGAAGAAGCGTGG 483504 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319 |||||| | ||||| ||| || |||||||| ||||||||||||||||| || || Sbjct 483503 CCTCATGGCTGGTCTGACCTTTTCGAACGAGCTCATCTCTCGTGACGAGGGCCTGCA 483447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738054803200