Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq73 277 2e-69
seq24 111 2e-19
seq16 100 3e-16
>seq73
Length=484926
Score = 277 bits (306), Expect = 2e-69
Identities = 1068/1656 (64%), Gaps = 45/1656 (3%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556
|||||| ||||| |||||||| ||||| |||||| ||||| ||||| | | ||| |
Sbjct 52204 GTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAGCAGCCATCTGCACAATGTT 52145
Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616
|| || | ||| |||||||| |||||||| | | ||| ||||| || ||||
Sbjct 52144 ACGCT---GAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTAATATCTGATGGGATGTT 52088
Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676
|| || || || || |||||| | | ||| | | |||||| | | |||||
Sbjct 52087 GGGAATATTCTGGATGGAACCACCATCAGCGATAATGCGGTTCTTCATGTTGTCAGACCA 52028
Query 109677 GAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736
||| || | | ||||| | | ||| ||| ||||| || || || ||
Sbjct 52027 GAGTCCCATATCGACAAGATCCTTGAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGC 51968
Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796
||| || ||| ||| ||||| | ||||| || || || ||||| ||| || ||
Sbjct 51967 AAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAG 51908
Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856
||| || |||| || || ||||| ||||| | ||||||||||| |||| || |
Sbjct 51907 GATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATG 51848
Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACC 109916
||| | | ||| || |||||||| | || | || | | |||
Sbjct 51847 TTGCTTGATCTGCTGCTTCAAGCTATCCCAATCCCAGAGATCTGTAGGAGT-GACTC--- 51792
Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976
|||||||||| |||||| | || | | ||||| || || | | |||| ||
Sbjct 51791 --CCCACATATCATATTGAAGCTCTCCTTTCGACGCAGGGGATCCTTCATATGTCTCATA 51734
Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036
|| || | || || ||| | ||| ||||| || || | || || ||||||||
Sbjct 51733 CGGGCCATTAATCTTGGCAAGCTCTACGGAAGCAGTAAGAGCACCGTGGTAGATAGTCTC 51674
Query 110037 AAAAATATGAGCATTCATGAGGCGA-GACTCTTCACAGTCGAAGGGAAGAC-CACAAAGA 110094
|| || ||| ||| | || || | ||| |||| || |||| || || | |
Sbjct 51673 GAAGATTTGAATATTGA-GATGCTTTGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCCA 51615
Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154
| ||| ||||||| | ||||| ||||| | ||||||| ||||| | ||| |
Sbjct 51614 AGAAAG-CATCCGCCAATCCCTGTACACCAACTGCAATGGGACGATGACGGAAGTT-GCT 51557
Query 110155 CGTCGA-GCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGT 110213
| || || | |||||||| |||| ||||||| | || | ||||| ||
Sbjct 51556 CTTCCTTGCCTCTGGGACGGGGTAGTAGTTAACATCGATGATCTTGTTCAAGTTCTTGGT 51497
Query 110214 CACAGTCTTCGT-GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGA 110272
||| ||| | || ||| || || || | | | || | || | | | ||| |
Sbjct 51496 AACAA-CTTGGACGACTTCGTGAAGCTTCTGGAAGTCATAAGTCCCATTGTTCATATCCA 51438
Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332
|| | |||| || |||||||| || | ||||| |||| | ||| || | ||
Sbjct 51437 CAAAGGTGGGAAGTGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGT 51378
Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392
|||| | ||| || || ||||||||||| || || |||| ||||||||| ||
Sbjct 51377 ATTCGACAATCTCTGTGCACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGC 51318
Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452
||| |||||| |||||||| ||||||||| ||||| | ||||| || || |||| |
Sbjct 51317 TCTTGCGGTTGCACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTT 51258
Query 110453 TGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT--CCTC 110510
|| |||| | ||| | | || || || | || | | |||| ||||
Sbjct 51257 CAAGGATGGAATACCAGAGCTTTTGAGCCTTTACGGT--CTTTCG---GCCCTTGCCCTC 51203
Query 110511 ---CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567
||| ||||| |||||| | ||||| || | |||||| ||||| | |||||
Sbjct 51202 GCGCTCATACTTCTCGTACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGG 51143
Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627
|| | ||||| | |||| ||| | ||| | |||||||||||||||||| ||
Sbjct 51142 ACACTCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAG 51083
Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687
|| |||||||||| || |||| || || || |||| | || || | ||| || ||
Sbjct 51082 ATCGGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATT 51023
Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747
| || || | || || | || ||| | ||||||||| || || |||| ||| |
Sbjct 51022 CTTTCTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAA 50963
Query 110748 GGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801
|| || | |||| ||| | || | |||||| | |||||| ||||| ||
Sbjct 50962 GGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAAC 50906
Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861
| ||||| || | ||| |||| || ||| || || || ||| ||| | |
Sbjct 50905 ACGCAGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGT 50846
Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921
|| || || |||||||| | |||||| ||||| || ||| ||| |||||
Sbjct 50845 AGCTCGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACA 50786
Query 110922 C-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980
||| | || ||| |||| ||||||||||| ||| |||| | | | || ||||
Sbjct 50785 TGTCT-TCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGC 50727
Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040
| || |||||||||| |||| ||||| ||| ||||||||||||| | ||||| |||
Sbjct 50726 ATGATGACATCTGAGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGA 50667
Query 111041 ACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTG 111098
|| |||| |||||| ||||||||| |||| |||||| | ||||| || ||
Sbjct 50666 --AGTACTTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATG 50609
Query 111099 AATACCAATGGCAACTCGCATGAACATATATTGAGG 111134
||||||| || || ||||||| ||| | ||| ||
Sbjct 50608 GATACCAACAGCCACACGCATGATCATGTGTTGTGG 50573
>seq24
Length=853129
Score = 111 bits (122), Expect = 2e-19
Identities = 338/512 (66%), Gaps = 9/512 (2%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| ||||| |||| ||| || ||||| || ||||||||| |||||||||| || |||||
Sbjct 483147 TAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTCTCCATG 483206
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || || ||| || || || ||| | ||| ||||| ||| ||| ||
Sbjct 483207 AAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTT-ACCAAGAGCCGTCAAAAGTCG 483265
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
||| | ||| |||||||||||| ||| | || ||||| || | | |||
Sbjct 483266 ATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAGTAAGGCACA 483325
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445
|||||||| || | ||| ||||| ||| || | |||||||| | | ||| |
Sbjct 483326 GGGGAGAGCCTCTGTTAAGAA-TTCTTGCTCAATGGCAACAGCTTCGGTGATGATATCCT 483384
Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTT 119505
| | || | | | ||| || ||||| | ||| | ||||| ||
Sbjct 483385 GGACAGCCTGTTTGCTTGGGCGGTGCTTCAAGTGAGAAAATAGAAGGCATGCAAAGTCGG 483444
Query 119506 GATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTC 119565
||| || || || || |||||||||||||| || ||| || |||| |||||| |
Sbjct 483445 TATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGGTCAGACCAGCCATGAGGC 483504
Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625
| | ||||| ||||||||||| || |||| ||| ||||| ||||| |||||
Sbjct 483505 CACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGAAGAAAATGCCTTCCACGG 483564
Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC--GAA-CCACTTGAGA 119681
||||| || | | ||| | || ||||| || |||||| ||| ||| | |
Sbjct 483565 CAGCGAATGCAACCAAACGTTGGGC-GAAGGTGGACTTCTTGTCTTGAATCCATCTAACT 483623
Query 119682 GCCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713
||||| | |||||| || |||||||||||
Sbjct 483624 GCCCAATCGGCCTTCTTCTTGATGCAGGGGAC 483655
>seq16
Length=379189
Score = 100 bits (110), Expect = 3e-16
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
||||| | || ||||||||||||||||| | || || ||| | | | |||
Sbjct 192720 TTACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTTCTTGCGGTA 192661
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791
|||| || || || || | || |||||||| |||||||| || ||||| | |
Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| || || | ||||| |||||| || | |||||||||||| | || || |||||||
Sbjct 192600 CCGCTGA-CGCTGAA-GAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907
||||||| |||||||| | |||| | | || || || |||||||||||||||
Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971877168000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |