Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq73 271 9e-68
seq16 98.7 1e-15
seq1 82.4 9e-11
>seq73
Length=484926
Score = 271 bits (300), Expect = 9e-68
Identities = 1125/1744 (65%), Gaps = 43/1744 (2%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|||||||| ||||| |||||||| | || | ||||| | | |||||| | |
Sbjct 52296 CGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGCTTGTG 52237
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGA 105707
| |||| ||| || || | |||| || ||||| ||| |||| | |||||||
Sbjct 52236 ATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACT--GATCAATGA 52179
Query 105708 AGCGACCACGTTGTGCCGCCATAT---CAATGACATCCTTCATCTTGATTTCCCACACTG 105764
| |||||| | || ||||| | ||||| | || || ||||| || |
Sbjct 52178 AAGCACCACGGTCAGCAGCCATCTGCACAATGTTACGCTGAGAA---ATCTCCCAGACGG 52122
Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCG 105824
| ||||||| ||| ||||| |||||| | | ||||| || || ||||| ||
Sbjct 52121 TCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGAACCACCAT 52062
Query 105825 CCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA 105884
| || ||| | | |||||| | | ||||| || || || | ||||| ||||
Sbjct 52061 CAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATCGACAAGATCCTTGA 52002
Query 105885 CGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCG 105944
|| ||| || | | |||||||| || || | | || ||||| |
Sbjct 52001 GAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGTTGG 51942
Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 106004
||||| || |||||||| || || ||| | ||| || ||| ||| |||||||
Sbjct 51941 AGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTGGCA 51882
Query 106005 TTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACAT 106064
| || || | || ||||||||| || | || | || |||||| | | ||| | ||
Sbjct 51881 TAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTGCTTCAAGCTAT 51822
Query 106065 CCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122
|||| || || || || || | || | ||||||||||| |||||||| | ||||
Sbjct 51821 CCCAATCCCAGA-GATCTGTAGGAGTGAC-TCCCCACATATCATATTGAAGCTCTCCTTT 51764
Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACC-TTGGGCTTCAGCCAATTCACAGC 106181
|||| || || || ||| |||||||||| | || || ||| || | || |
Sbjct 51763 CGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTG-GCAAGCTCTACGG 51705
Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241
|| || | |||| || || || || ||||| || ||| | | ||| || |
Sbjct 51704 AAGCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGAGATGCTTTGCCT 51645
Query 106242 CATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACC 106299
|| ||| ||||| | | | ||| | || ||| ||||||| | || || |||||
Sbjct 51644 CAGGTGAGTCAAAAG-GAACACGCAGAGCCAAGAAAG-CATCCGCCAATCCCTGTACACC 51587
Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAAT 106358
| |||| || | || || | || ||| | || ||| ||||| || | |
Sbjct 51586 AACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCC-TCTGGGACGGGGTAGTAGT 51528
Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATTTCATGAAGTTTT 106417
| || |||| ||| | || |||||||||| ||| | || ||| ||||| ||
Sbjct 51527 TAACATCGATGATCTTGTTCAAGTTCTTGGTAACAA-CTTGGACGACTTCGTGAAGCTTC 51469
Query 106418 TCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
| | ||| |||| | | | | || ||| | | ||||| || || || |||||
Sbjct 51468 TGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAATAGAGGCCAAG 51409
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||| ||||| ||||||| | || ||| || | ||| ||||| |||||||||||
Sbjct 51408 TTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAAGTTGGAG 51349
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || |||| ||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 51348 CTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTGTAGAGC 51289
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656
||| | || | || ||||| || |||| | || || | | ||| | | | | | |
Sbjct 51288 ATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGAGCTTTTGAGCC 51229
Query 106657 TGGTACAATGGCGTT-GGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
| ||| | | || ||||| | ||||| ||| ||||| ||| | |||||||||
Sbjct 51228 T-TTAC--GGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAAGCTTCAAAC 51172
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774
|| || || | || | ||||| || || | |||||| | || | ||| |
Sbjct 51171 TCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCAGGGTCCACTCT 51112
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
|| | |||||||| ||||||||| || || |||||||||| || | ||||||||
Sbjct 51111 CCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCATAGAAGAGATCG 51052
Query 106835 C-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893
| | || ||| | || || | ||| || || || | || |||||||| | || |||
Sbjct 51051 CGTGCA-CGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAACTCGAAGACATC 50993
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 106947
||||||||||||||||| |||| || | | || ||||| ||| ||||
Sbjct 50992 AGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC---AGGACGCTTGTTACCACCTTG 50936
Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007
|| ||||| | |||||| ||| || || || |||||||| | |||||||| ||
Sbjct 50935 ATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCATTCGAGAA 50876
Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067
||| || || || ||| || | | |||| | ||||| | | |||||
Sbjct 50875 ACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTCGGATTCTGTGGATATTGAGACCAAT 50816
Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127
|| || || ||| || || ||||| | | || || |||||||||| | ||
Sbjct 50815 GCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATAGATACCATCAAT 50756
Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187
||| ||||| | | | |||||||| |||||||| | || || |||||
Sbjct 50755 GCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTGAGCCTGAGGGGTTCCAGC 50696
Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCT 107246
| ||||||| || || | || || |||| ||| | | |||||| || ||||||||
Sbjct 50695 ACTGAAGAGTGTAGGAGAAGCATGTGTGAA-GTACTTGTTCGACATCAAGTTGTATGTCT 50637
Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306
| | | || ||||| ||||| || ||||| || | ||||||||||| | ||||| ||
Sbjct 50636 CGATTGCGGATTCAATATCTTCGCCATGGATACCAACAGCCACACGCATGATCATGTGTT 50577
Query 107307 GGGG 107310
| ||
Sbjct 50576 GTGG 50573
>seq16
Length=379189
Score = 98.7 bits (108), Expect = 1e-15
Identities = 276/416 (66%), Gaps = 16/416 (4%)
Strand=Plus/Minus
Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251
||||| || || || ||||| | |||||| | ||| |||| ||| | |||||| |
Sbjct 192897 CGATCGAAACGTCCAGGACGCATGAGCGCTTTATCCAGGACATCTGGTCTATTCGTACCA 192838
Query 9252 GCGATGACAACAATACCTGTTTC--ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9309
|| | ||| || | | |||| | | ||| ||||||||||| || ||||| | || |
Sbjct 192837 GCAAGGACCACGA--CTTGTTCCGAAGTATTGAAACCATCCATTTCAGTCAAGATCTGAT 192780
Query 9310 TAATAGTTTGTTCCCGTTCATCATT-----CGCTGGCATA-CCACCAGCACTGCGTTGCT 9363
| | || ||| |||||||| | ||||| | || || | || |
Sbjct 192779 TGAGGGTGGCTTCTCGTTCATCCGTTCCACCGCTGAAGTTGCCGCCTTTGCCACGAGATT 192720
Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATT 9422
| || | |||||||||||||| ||||||| ||| |||||| || | || | ||| |
Sbjct 192719 TACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTT-CTTGCGGTA 192661
Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9480
| |||||||| || || || ||| || ||||| || ||||| ||||| || | |
Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601
Query 9481 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540
| || || | || ||||||||| | || ||||| || | || ||| || ||||
Sbjct 192600 CCGCTGACGCT--GAAGAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543
Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596
||||||| ||||| || || | | || || || || || |||||||| |||
Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487
>seq1
Length=824168
Score = 82.4 bits (90), Expect = 9e-11
Identities = 168/250 (67%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| ||| | || || || || |||||||| ||||| ||| ||||| |
Sbjct 648466 ATGGACGTATCGCTCCCCGCTCTGGTCTCGCCTCTAAGCACTCAATTTCTACGGGTGCTG 648407
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| ||||| | || ||| ||| || || ||| | ||||||||||| |||||
Sbjct 648406 GTGTGATTGACGCTGATTATCGAGGACCTGTAAAGGTCTTGCTCTTCAATCATGGAGAGG 648347
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 155224
||||| |||| | || |||| ||||| || |||||| | ||| | ||| | | |
Sbjct 648346 TAGACTATGAGATCAAAGAAGGCGATCGTATTGCACAATTGGTCTTGGAGAGGATCTATA 648287
Query 155225 CACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGTGGATTTG 155284
| || || || | || | | | | || ||||| | |||||||||||||||||||
Sbjct 648286 CCCCGGAAGTCCAAGAGGTGGAGGAATTGGATGAGACTGTTAGAGGTGCGGGTGGATTTG 648227
Query 155285 GATCTACTGG 155294
|| ||| ||
Sbjct 648226 GAAGTACCGG 648217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589976670134400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |