Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq73 271 9e-68 seq16 98.7 1e-15 seq1 82.4 9e-11 >seq73 Length=484926 Score = 271 bits (300), Expect = 9e-68 Identities = 1125/1744 (65%), Gaps = 43/1744 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 |||||||| ||||| |||||||| | || | ||||| | | |||||| | | Sbjct 52296 CGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGCTTGTG 52237 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGA 105707 | |||| ||| || || | |||| || ||||| ||| |||| | ||||||| Sbjct 52236 ATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACT--GATCAATGA 52179 Query 105708 AGCGACCACGTTGTGCCGCCATAT---CAATGACATCCTTCATCTTGATTTCCCACACTG 105764 | |||||| | || ||||| | ||||| | || || ||||| || | Sbjct 52178 AAGCACCACGGTCAGCAGCCATCTGCACAATGTTACGCTGAGAA---ATCTCCCAGACGG 52122 Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCG 105824 | ||||||| ||| ||||| |||||| | | ||||| || || ||||| || Sbjct 52121 TCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGAACCACCAT 52062 Query 105825 CCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA 105884 | || ||| | | |||||| | | ||||| || || || | ||||| |||| Sbjct 52061 CAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATCGACAAGATCCTTGA 52002 Query 105885 CGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCG 105944 || ||| || | | |||||||| || || | | || ||||| | Sbjct 52001 GAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGTTGG 51942 Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 106004 ||||| || |||||||| || || ||| | ||| || ||| ||| ||||||| Sbjct 51941 AGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTGGCA 51882 Query 106005 TTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACAT 106064 | || || | || ||||||||| || | || | || |||||| | | ||| | || Sbjct 51881 TAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTGCTTCAAGCTAT 51822 Query 106065 CCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||| || || || || || | || | ||||||||||| |||||||| | |||| Sbjct 51821 CCCAATCCCAGA-GATCTGTAGGAGTGAC-TCCCCACATATCATATTGAAGCTCTCCTTT 51764 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACC-TTGGGCTTCAGCCAATTCACAGC 106181 |||| || || || ||| |||||||||| | || || ||| || | || | Sbjct 51763 CGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTG-GCAAGCTCTACGG 51705 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 || || | |||| || || || || ||||| || ||| | | ||| || | Sbjct 51704 AAGCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGAGATGCTTTGCCT 51645 Query 106242 CATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACC 106299 || ||| ||||| | | | ||| | || ||| ||||||| | || || ||||| Sbjct 51644 CAGGTGAGTCAAAAG-GAACACGCAGAGCCAAGAAAG-CATCCGCCAATCCCTGTACACC 51587 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAAT 106358 | |||| || | || || | || ||| | || ||| ||||| || | | Sbjct 51586 AACTGCAATGGGACGATGACGGAAGTTGCTCTTCCTTGCC-TCTGGGACGGGGTAGTAGT 51528 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATTTCATGAAGTTTT 106417 | || |||| ||| | || |||||||||| ||| | || ||| ||||| || Sbjct 51527 TAACATCGATGATCTTGTTCAAGTTCTTGGTAACAA-CTTGGACGACTTCGTGAAGCTTC 51469 Query 106418 TCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | | ||| |||| | | | | || ||| | | ||||| || || || ||||| Sbjct 51468 TGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAATAGAGGCCAAG 51409 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||| ||||| ||||||| | || ||| || | ||| ||||| ||||||||||| Sbjct 51408 TTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAAGTTGGAG 51349 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || |||| ||||| ||||| ||||| |||||||||||||||||||||| Sbjct 51348 CTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTGTAGAGC 51289 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656 ||| | || | || ||||| || |||| | || || | | ||| | | | | | | Sbjct 51288 ATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGAGCTTTTGAGCC 51229 Query 106657 TGGTACAATGGCGTT-GGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | ||| | | || ||||| | ||||| ||| ||||| ||| | ||||||||| Sbjct 51228 T-TTAC--GGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAAGCTTCAAAC 51172 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774 || || || | || | ||||| || || | |||||| | || | ||| | Sbjct 51171 TCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCAGGGTCCACTCT 51112 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || | |||||||| ||||||||| || || |||||||||| || | |||||||| Sbjct 51111 CCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCATAGAAGAGATCG 51052 Query 106835 C-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | | || ||| | || || | ||| || || || | || |||||||| | || ||| Sbjct 51051 CGTGCA-CGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAACTCGAAGACATC 50993 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 106947 ||||||||||||||||| |||| || | | || ||||| ||| |||| Sbjct 50992 AGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC---AGGACGCTTGTTACCACCTTG 50936 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 || ||||| | |||||| ||| || || || |||||||| | |||||||| || Sbjct 50935 ATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCATTCGAGAA 50876 Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 ||| || || || ||| || | | |||| | ||||| | | ||||| Sbjct 50875 ACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTCGGATTCTGTGGATATTGAGACCAAT 50816 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 || || || ||| || || ||||| | | || || |||||||||| | || Sbjct 50815 GCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATAGATACCATCAAT 50756 Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187 ||| ||||| | | | |||||||| |||||||| | || || ||||| Sbjct 50755 GCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTGAGCCTGAGGGGTTCCAGC 50696 Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCT 107246 | ||||||| || || | || || |||| ||| | | |||||| || |||||||| Sbjct 50695 ACTGAAGAGTGTAGGAGAAGCATGTGTGAA-GTACTTGTTCGACATCAAGTTGTATGTCT 50637 Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306 | | | || ||||| ||||| || ||||| || | ||||||||||| | ||||| || Sbjct 50636 CGATTGCGGATTCAATATCTTCGCCATGGATACCAACAGCCACACGCATGATCATGTGTT 50577 Query 107307 GGGG 107310 | || Sbjct 50576 GTGG 50573 >seq16 Length=379189 Score = 98.7 bits (108), Expect = 1e-15 Identities = 276/416 (66%), Gaps = 16/416 (4%) Strand=Plus/Minus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 ||||| || || || ||||| | |||||| | ||| |||| ||| | |||||| | Sbjct 192897 CGATCGAAACGTCCAGGACGCATGAGCGCTTTATCCAGGACATCTGGTCTATTCGTACCA 192838 Query 9252 GCGATGACAACAATACCTGTTTC--ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9309 || | ||| || | | |||| | | ||| ||||||||||| || ||||| | || | Sbjct 192837 GCAAGGACCACGA--CTTGTTCCGAAGTATTGAAACCATCCATTTCAGTCAAGATCTGAT 192780 Query 9310 TAATAGTTTGTTCCCGTTCATCATT-----CGCTGGCATA-CCACCAGCACTGCGTTGCT 9363 | | || ||| |||||||| | ||||| | || || | || | Sbjct 192779 TGAGGGTGGCTTCTCGTTCATCCGTTCCACCGCTGAAGTTGCCGCCTTTGCCACGAGATT 192720 Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATT 9422 | || | |||||||||||||| ||||||| ||| |||||| || | || | ||| | Sbjct 192719 TACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTT-CTTGCGGTA 192661 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9480 | |||||||| || || || ||| || ||||| || ||||| ||||| || | | Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601 Query 9481 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | || || | || ||||||||| | || ||||| || | || ||| || |||| Sbjct 192600 CCGCTGACGCT--GAAGAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596 ||||||| ||||| || || | | || || || || || |||||||| ||| Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487 >seq1 Length=824168 Score = 82.4 bits (90), Expect = 9e-11 Identities = 168/250 (67%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| ||| | || || || || |||||||| ||||| ||| ||||| | Sbjct 648466 ATGGACGTATCGCTCCCCGCTCTGGTCTCGCCTCTAAGCACTCAATTTCTACGGGTGCTG 648407 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| ||||| | || ||| ||| || || ||| | ||||||||||| ||||| Sbjct 648406 GTGTGATTGACGCTGATTATCGAGGACCTGTAAAGGTCTTGCTCTTCAATCATGGAGAGG 648347 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 155224 ||||| |||| | || |||| ||||| || |||||| | ||| | ||| | | | Sbjct 648346 TAGACTATGAGATCAAAGAAGGCGATCGTATTGCACAATTGGTCTTGGAGAGGATCTATA 648287 Query 155225 CACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGTGGATTTG 155284 | || || || | || | | | | || ||||| | ||||||||||||||||||| Sbjct 648286 CCCCGGAAGTCCAAGAGGTGGAGGAATTGGATGAGACTGTTAGAGGTGCGGGTGGATTTG 648227 Query 155285 GATCTACTGG 155294 || ||| || Sbjct 648226 GAAGTACCGG 648217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976670134400