Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq9 127 2e-24
seq74 82.4 9e-11
>seq9
Length=1359104
Score = 127 bits (140), Expect = 2e-24
Identities = 190/270 (70%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
||| ||||| | |||| ||| | ||||| | ||| | || || ||||| |||||
Sbjct 232216 TGATATTGCGTTCGGTAACTCGCAGCGATTTGGCGTACCTTTTGGTTATGGAGGACCTCA 232275
Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
||| ||||| |||||| | | || || |||||||||||||| || || | ||| | ||
Sbjct 232276 TGCGGCATTTTTTGCAGCTGCTGAAAAATATAAGAGAAAGATTCCAGGACGTATTATTGG 232335
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| || ||| || || | | ||| | || ||||| ||||||| ||||||||
Sbjct 232336 TGTTTCGAAAGACAGGCTTGGAGACAGAGCGAATAGGCTAGCATTACAGACCAGAGAGCA 232395
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
|||||| || | || || || ||||| ||| | || || ||||| || ||| |||| ||
Sbjct 232396 GCATATTCGACGGGAGAAGGCTACCAGCAACGTATGTACGGCACAGGCGCTGTTGGCAAA 232455
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGG 158690
|||| || ||||||||| ||||| ||
Sbjct 232456 TATGAGTGCATTCTATGCAATTTATCACGG 232485
>seq74
Length=81004
Score = 82.4 bits (90), Expect = 9e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 157891 GGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAG 157949
|||||| |||||| ||| | ||| || || | || ||| | |||||||||||
Sbjct 22301 GGATACGCTGGAACGCATGTC-CCCGAGGTTATCAAACGTAACATCCTTGAGAATCCAGC 22359
Query 157950 TTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTT 158009
||||| ||| |||||| || || || | ||||| |||||| | | ||| | |
Sbjct 22360 ATGGTATACAAGTTACACGCCGTACCAGCCAGAGATCAGCCAGGGACGGCTCGAATCACT 22419
Query 158010 ATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCT 158069
|| || ||||| || ||| | | || ||||||| || || || || ||||| || ||
Sbjct 22420 GTTAAACTACCAGACCCTCGTATCCGATCTCACAGCCCTTCCAATTGCGAACGCGTCGCT 22479
Query 158070 ATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|| ||||| | || || |||||||| ||||||
Sbjct 22480 TTTGGATGAGCCTACAGCCGCAGCAGAGGCAATG 22513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047083641600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |