Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9 127 2e-24 seq74 82.4 9e-11 >seq9 Length=1359104 Score = 127 bits (140), Expect = 2e-24 Identities = 190/270 (70%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||| ||||| | |||| ||| | ||||| | ||| | || || ||||| ||||| Sbjct 232216 TGATATTGCGTTCGGTAACTCGCAGCGATTTGGCGTACCTTTTGGTTATGGAGGACCTCA 232275 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 ||| ||||| |||||| | | || || |||||||||||||| || || | ||| | || Sbjct 232276 TGCGGCATTTTTTGCAGCTGCTGAAAAATATAAGAGAAAGATTCCAGGACGTATTATTGG 232335 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | || ||| || || | | ||| | || ||||| ||||||| |||||||| Sbjct 232336 TGTTTCGAAAGACAGGCTTGGAGACAGAGCGAATAGGCTAGCATTACAGACCAGAGAGCA 232395 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 |||||| || | || || || ||||| ||| | || || ||||| || ||| |||| || Sbjct 232396 GCATATTCGACGGGAGAAGGCTACCAGCAACGTATGTACGGCACAGGCGCTGTTGGCAAA 232455 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGG 158690 |||| || ||||||||| ||||| || Sbjct 232456 TATGAGTGCATTCTATGCAATTTATCACGG 232485 >seq74 Length=81004 Score = 82.4 bits (90), Expect = 9e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 157891 GGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAG 157949 |||||| |||||| ||| | ||| || || | || ||| | ||||||||||| Sbjct 22301 GGATACGCTGGAACGCATGTC-CCCGAGGTTATCAAACGTAACATCCTTGAGAATCCAGC 22359 Query 157950 TTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTT 158009 ||||| ||| |||||| || || || | ||||| |||||| | | ||| | | Sbjct 22360 ATGGTATACAAGTTACACGCCGTACCAGCCAGAGATCAGCCAGGGACGGCTCGAATCACT 22419 Query 158010 ATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCT 158069 || || ||||| || ||| | | || ||||||| || || || || ||||| || || Sbjct 22420 GTTAAACTACCAGACCCTCGTATCCGATCTCACAGCCCTTCCAATTGCGAACGCGTCGCT 22479 Query 158070 ATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || ||||| | || || |||||||| |||||| Sbjct 22480 TTTGGATGAGCCTACAGCCGCAGCAGAGGCAATG 22513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047083641600