Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq46 161 2e-34 seq73 104 5e-17 >seq46 Length=1090308 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || |||||||| || ||||| || | ||||||| ||||| || ||||| Sbjct 104552 GTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCAAGCTG 104611 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || |||||||| |||||||| || || ||||| ||||| || Sbjct 104612 CTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTT 104671 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||| || ||| || |||||||| | ||||| || || Sbjct 104672 GGACTTGACGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTGCCAGT 104731 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | |||||| Sbjct 104732 GAGAGTCTTGACAAAAATTTGCAT 104755 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| |||||| ||| ||||| || ||||| ||| | ||||| ||||| || Sbjct 104318 AACCAAGTGGAGAGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCGTCCATCCTC 104377 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || |||||||| || || || || || || ||||| Sbjct 104378 GAGCTGCTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTATCTTG 104437 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || |||||||| || || ||||| | ||||| ||||| Sbjct 104438 AATCTTGGACTTCACGTTGTCGATGGTGTCGGACGACTCAACTTCCAAGGTAATGGTCTT 104497 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 104498 ACCAGTGAGAGTCTTGACGAAGATTTGCAT 104527 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||| || || || || ||||| ||| | ||| | ||||| |||||||| Sbjct 104096 GTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCCTCGAGCTG 104155 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || |||||||| || || || || || ||||| || || || Sbjct 104156 CTTGCCAGCGAAAATGAGACGCTGTTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTT 104215 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| |||||||| ||||| ||||||||| || || | |||||||| || Sbjct 104216 AGACTTGACGTTGTCAATGGTATCCGAGGATTCCACTTCCAGAGTGATAGTCTTTCCAGT 104275 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 104276 CAATGTCTTCACGAAAATCTGCAT 104299 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| || ||||| || || || || || |||| ||| |||| || || ||| Sbjct 104775 ACAAGATGAAGGGTAGACTCCTTCTGGATGTTATAGTCGGAAAGGGTTCGGCCGTCCTCG 104834 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || ||||| || || || ||||| || |||||||| Sbjct 104835 AGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCCGGGGGGATGCCCTCCTTGTCTTGG 104894 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || |||||||| || || || ||||| || | ||||| Sbjct 104895 ATCTTGCTCTTAACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 104954 Query 195112 CCTGT 195116 || || Sbjct 104955 CCGGT 104959 >seq73 Length=484926 Score = 104 bits (114), Expect = 5e-17 Identities = 193/281 (69%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||| ||| | |||| | ||||||| ||||||||||| || | | || || || ||| Sbjct 51059 TTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTGAGAAAAACGGAGAGTGG 51118 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||| | ||||| ||||| ||||| || | ||||| || || ||||| || Sbjct 51119 ACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTCTACGGAGATGAGTTTGAA 51178 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGG-AAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 || | || || | || || ||||| ||| ||| |||| ||| ||||| ||| | Sbjct 51179 GCTTTGTACGAGAAGTATGAGCGCGAGGGCAAGGGCC-GAAAGACCGTAAAGGCTCAAAA 51237 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 || ||| || |||||||| || ||| |||| || | || || || ||||| Sbjct 51238 GCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAACCCATTCATGCTCTACAA 51297 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 |||||| | |||||||| |||||||||||| | |||| Sbjct 51298 GGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAA 51338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109473639469520