Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq46 123 2e-22 seq59 105 5e-17 >seq46 Length=1090308 Score = 123 bits (136), Expect = 2e-22 Identities = 453/707 (64%), Gaps = 3/707 (0%) Strand=Plus/Plus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||||| |||||||| ||||||||||||| | ||||| || |||| || |||| | || Sbjct 2160 GCTCTCCGTCGTCTCCGAACTGCTTGCGAGCGTGCCAAGCGTACTCTCTCTTCTGCTGCT 2219 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || ||| | || || | || || | | |||||| |||| | | || | || | Sbjct 2220 CAGACCTCCATCGAGATCGACTCCCTCTATGAGGGTGTTGACTTCTACACTTCCATCACC 2279 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | |||| ||| || || |||| || ||||| ||| || | || ||||| || Sbjct 2280 CGTGCCAGATTCGAGGAACTTTGCCAGGACCTCTTCAGATCCACTCTCGAGCCAGTCGAG 2339 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | || || |||| | ||||| || || |||| || || || ||||| || || ||| Sbjct 2340 CGTGTCTTGCAAGATGCTAAGATCGACAAGTCCAGCGTCCACGAGATTGTCCTCGTCGGT 2399 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA 552194 || ||||| | || || | ||| | | | | | || ||||| || || | Sbjct 2400 GGCTCTACCCGTATCCCAAGAATCCAGAAGCTCATCACCGATTTCTTCAACGGCAAGGAG 2459 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 || | | | || || || |||||||||||||| ||||| || | || || ||| Sbjct 2460 CCCAACAAGTCTATCAACCCCGACGAGGCTGTTGCCTACGGTGCTGCTGTCCAGGCTGCT 2519 Query 552255 ATTCTTTCTGGACA-AACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACT 552311 || || ||||| | | | | | || | || || | || | || | |||||| | Sbjct 2520 ATCCTCTCTGGTGATACCAGCTCCAAGTCCACCAACGAGATCTTGCTCCTCGATGTTGCC 2579 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 || | ||||| ||| | || || | ||| || ||||| || || || |||| Sbjct 2580 CCATTGTCTCTCGGTATCGAGACTGCTGGTGGCCAGATGACCAAGCTCATTCCCCGAAAC 2639 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 |||||||| || || || || || || || || | || || || || ||| | Sbjct 2640 ACTACTATCCCAACCAAGAAGTCCGAAGTCTTCTCCACCTTCTCCGACAACCAGCCTGGT 2699 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT 552491 || || ||| | || || || ||| | ||| || || || || || || Sbjct 2700 GTGCTCATCCAAGTCTTCGAGGGTGAACGTGCTCGCACCAAGGACAACAACTTGCTCGGC 2759 Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 | || | | ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct 2760 AAGTTCGAGCTTACCGGTATCCCACCCGCTCCACGTGGTGTTCCACAGATTGAGGTTACC 2819 Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||||| | |||||||||||||| |||| || ||||| ||| || Sbjct 2820 TTCGATCTTGATGCCAATGGAATCATGAACGTCTCTGCTCTTGAGAA 2866 Score = 98.7 bits (108), Expect = 8e-15 Identities = 378/591 (64%), Gaps = 2/591 (0%) Strand=Plus/Plus Query 549993 CTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAG 550052 |||||||||| ||| | ||||| || || ||||| ||||| | | | ||| | | Sbjct 1402 CTATAGGTATTGATCTTGGAACGACCTACTCCTGTGTAGGTGTCTTTCGAGATGACAGAA 1461 Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 | |||||||| ||||| || || |||||| |||| || || || | ||| | ||||| | Sbjct 1462 TCGAAATTATCGCCAACGACCAGGGTAACCGAACGACGCCCTCGTTCGTTGCCTTCACCG 1521 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || || | | | | |||||||| || || |||||| | | || | | || | Sbjct 1522 ATACGGAGCGTCTGATCGGTGATGCTGCTAAGAATCAAGTCGCCATGAACGCAGCAAACA 1581 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 || | || ||||| || || || ||||| | | || || || | || ||||| | Sbjct 1582 CTGTCTTCGATGCCAAGCGATTGATTGGCCGCAAGTTCAACGACCCTGAAGTCCAGGCCG 1641 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 |||||||||| | || ||| | ||||| | ||||| || |||| || | Sbjct 1642 ATATGAAGCACTTCCCATTCAAGGTTGTTGACAAGGGAGGAAAGCCCCTCATTG-AGGTC 1700 Query 550293 CTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | | |||| | | || || || | |||||| | || || || ||||| || | Sbjct 1701 CAATTCAAGGGTGAGACCAAGCAGTTCACTCCAGAAGAGATCTCTTCCATGGTCTTGGTA 1760 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 || ||| | || || || | ||||| |||| | || || | || Sbjct 1761 AAGATGCGTGAGACTGCTGAGGCCTACCTTGGTGGTACCGTTAACAACGCCGTCGTCACC 1820 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| || || || ||||| || | || || || || |||||||| || ||| Sbjct 1821 GTCCCAGCCTACTTCAACGACTCCCAGAGACAGGCCACCAAGGATGCTGGCTTGATCGCT 1880 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || | || ||||| | || ||||| || || || || ||||| |||| || || || Sbjct 1881 GGTTTGAACGTTCTCAGAATCATCAACGAGCCCACCGCGGCTGCTATTGCTTACGGTCTC 1940 Query 550532 GATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || || | ||| || | || || |||||||| ||| ||| ||| Sbjct 1941 GACAAGAAGGTTGAGGGTGAGCGAAACGTCCTCATCTTCGATCTTGGTGGT 1991 >seq59 Length=381799 Score = 105 bits (116), Expect = 5e-17 Identities = 117/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 550379 GTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 ||||| ||||||| | || | || || || ||||| || || || || || ||| || Sbjct 335809 GTTGGGCAAGAAGGTCACCAAGGCTGTCATCACTGTCCCTGCCTACTTCAACGACAACCA 335868 Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAA 550497 ||||||||||| ||||||||||| || ||||| || || ||||| ||||| ||||| Sbjct 335869 GCGTCAAGCTACCAAAGATGCTGGTGCCATCGCTGGTCTCAACGTTCTCCGTATCATCAA 335928 Query 550498 TGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 || || |||||||| || |||| ||||| |||| Sbjct 335929 CGAGCCAACTGCTGCCGCTATTGCTTATGGTCTTG 335963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029266384674400