Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq46 134 1e-26
>seq46
Length=1090308
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || ||||| |||||||||||||| || ||||| || | || ||||| | |||| ||
Sbjct 104547 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCATCCTCA 104606
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || ||||| |||| ||||||||| || || ||||| || || || || |||
Sbjct 104607 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGAATTCCCTCCTTGTCCTGA 104666
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| |||| ||| || ||||| |||| || |||
Sbjct 104667 ATCTTGGACTTGACGTTGTCAATGGTGTCTGACGATTCGACCTCAAGGGTGATGGTCTTG 104726
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| || |||||
Sbjct 104727 CCAGTGAGAGTCTTGACAAAAATTTGCAT 104755
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||||||||| || || || || || || |||| | |||| | | || || | ||
Sbjct 104780 ATGAAGGGTAGACTCCTTCTGGATGTTATAGTCGGAAAGGGTTCGGCCGTCCTCGAGCTG 104839
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || || | |||||||||||| || || ||||| || || ||||| || ||
Sbjct 104840 CTTGCCAGCGAAGATGAGACGCTGTTGATCCGGGGGGATGCCCTCCTTGTCTTGGATCTT 104899
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | ||||| || | || || |||||||||| || ||||||||
Sbjct 104900 GCTCTTAACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 104959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396275695399920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |